Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH3P22223 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
CDH3P22223 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDH3P22223 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDH3P22223 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDH3P22223 RNU1-105P-201ENST00000363470 161 ntBASIC2.84□□□□□ -1.95
CDH3P22223 RNU6-512P-201ENST00000364438 103 ntBASIC2.84□□□□□ -1.95
CDH3P22223 RNU6-61P-201ENST00000365528 109 ntBASIC2.84□□□□□ -1.95
CDH3P22223 RNU6-217P-201ENST00000384164 104 ntBASIC2.84□□□□□ -1.95
CDH3P22223 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CDH3P22223 AL590004.2-201ENST00000404787 371 ntBASIC2.84□□□□□ -1.95
CDH3P22223 RNU6-193P-201ENST00000410977 107 ntBASIC2.84□□□□□ -1.95
CDH3P22223 RPL7P37-201ENST00000425095 738 ntBASIC2.84□□□□□ -1.95
CDH3P22223 AC092427.1-202ENST00000430569 476 ntBASIC2.84□□□□□ -1.95
CDH3P22223 HMGB1P27-201ENST00000431429 603 ntBASIC2.84□□□□□ -1.95
CDH3P22223 AC002486.1-201ENST00000435098 391 ntBASIC2.84□□□□□ -1.95
CDH3P22223 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH3P22223 AC025750.2-201ENST00000442609 450 ntBASIC2.84□□□□□ -1.95
CDH3P22223 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH3P22223 MRPS17P3-201ENST00000465453 385 ntBASIC2.84□□□□□ -1.95
CDH3P22223 AC116562.3-201ENST00000506136 177 ntBASIC2.84□□□□□ -1.95
CDH3P22223 AC108078.2-201ENST00000510750 236 ntBASIC2.84□□□□□ -1.95
CDH3P22223 AC010493.1-201ENST00000513479 292 ntBASIC2.84□□□□□ -1.95
CDH3P22223 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH3P22223 RNU6-928P-201ENST00000516876 104 ntBASIC2.84□□□□□ -1.95
CDH3P22223 RNA5SP290-201ENST00000517133 127 ntBASIC2.84□□□□□ -1.95
CDH3P22223 MTCYBP20-201ENST00000524239 1129 ntBASIC2.84□□□□□ -1.95
CDH3P22223 AC068587.5-201ENST00000528506 175 ntBASIC2.84□□□□□ -1.95
CDH3P22223 ELOCP31-201ENST00000540463 467 ntBASIC2.84□□□□□ -1.95
CDH3P22223 AC138761.3-201ENST00000579993 334 ntBASIC2.84□□□□□ -1.95
CDH3P22223 AL035413.2-201ENST00000604801 525 ntBASIC2.84□□□□□ -1.95
CDH3P22223 AC012557.2-201ENST00000605919 418 ntBASIC2.84□□□□□ -1.95
CDH3P22223 AC007684.1-201ENST00000609671 477 ntBASIC2.84□□□□□ -1.95
CDH3P22223 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CDH3P22223 AC130324.3-201ENST00000614165 542 ntBASIC2.84□□□□□ -1.95
CDH3P22223 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.84□□□□□ -1.95
CDH3P22223 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH3P22223 ASNSP3-201ENST00000451989 1306 ntBASIC2.84□□□□□ -1.96
CDH3P22223 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.84□□□□□ -1.96
CDH3P22223 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.84□□□□□ -1.96
CDH3P22223 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH3P22223 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDH3P22223 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH3P22223 Y_RNA.1-201ENST00000352915 104 ntBASIC2.83□□□□□ -1.96
CDH3P22223 Y_RNA.245-201ENST00000364493 95 ntBASIC2.83□□□□□ -1.96
CDH3P22223 SNORA9.2-201ENST00000365361 133 ntBASIC2.83□□□□□ -1.96
CDH3P22223 RNU6-190P-201ENST00000384154 102 ntBASIC2.83□□□□□ -1.96
CDH3P22223 RNU6-851P-201ENST00000384565 107 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AL122016.1-201ENST00000403365 367 ntBASIC2.83□□□□□ -1.96
CDH3P22223 RPS12P24-201ENST00000412619 387 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH3P22223 AL096701.2-201ENST00000416920 238 ntBASIC2.83□□□□□ -1.96
CDH3P22223 MTATP6P18-201ENST00000417994 673 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AL109913.1-201ENST00000421173 514 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AL353193.1-201ENST00000421444 268 ntBASIC2.83□□□□□ -1.96
CDH3P22223 ISCA1P1-201ENST00000426679 387 ntBASIC2.83□□□□□ -1.96
CDH3P22223 ELOCP14-201ENST00000428070 331 ntBASIC2.83□□□□□ -1.96
CDH3P22223 ELOCP7-201ENST00000439968 331 ntBASIC2.83□□□□□ -1.96
CDH3P22223 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH3P22223 MTND1P1-201ENST00000445453 368 ntBASIC2.83□□□□□ -1.96
CDH3P22223 FABP5P15-201ENST00000453566 214 ntBASIC2.83□□□□□ -1.96
CDH3P22223 RNU6-953P-201ENST00000459154 107 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AP001486.1-201ENST00000463339 476 ntBASIC2.83□□□□□ -1.96
CDH3P22223 RPS29P26-201ENST00000477483 171 ntBASIC2.83□□□□□ -1.96
CDH3P22223 RN7SL633P-201ENST00000488974 297 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AC097462.2-201ENST00000504623 481 ntBASIC2.83□□□□□ -1.96
CDH3P22223 RNU6-677P-201ENST00000516914 101 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH3P22223 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH3P22223 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH3P22223 AC174048.1-201ENST00000603389 144 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AC022893.3-201ENST00000607665 437 ntBASIC2.83□□□□□ -1.96
CDH3P22223 MIR7106-201ENST00000612419 65 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AC004852.3-201ENST00000614131 326 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AL158209.2-201ENST00000619266 216 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AC124864.2-201ENST00000624736 186 ntBASIC2.83□□□□□ -1.96
CDH3P22223 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH3P22223 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
CDH3P22223 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDH3P22223 FTLP6-201ENST00000355274 422 ntBASIC2.82□□□□□ -1.96
CDH3P22223 VTRNA1-1-201ENST00000363120 99 ntBASIC2.82□□□□□ -1.96
CDH3P22223 RNU6-1035P-201ENST00000384477 107 ntBASIC2.82□□□□□ -1.96
CDH3P22223 Y_RNA.516-201ENST00000384541 124 ntBASIC2.82□□□□□ -1.96
CDH3P22223 RNU6-140P-201ENST00000384566 108 ntBASIC2.82□□□□□ -1.96
CDH3P22223 Y_RNA.534-201ENST00000384599 112 ntBASIC2.82□□□□□ -1.96
CDH3P22223 MIR454-201ENST00000390180 115 ntBASIC2.82□□□□□ -1.96
CDH3P22223 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.82□□□□□ -1.96
CDH3P22223 AC068050.1-201ENST00000394891 380 ntBASIC2.82□□□□□ -1.96
CDH3P22223 RPS4XP8-201ENST00000402039 771 ntBASIC2.82□□□□□ -1.96
CDH3P22223 RNU2-9P-201ENST00000410194 145 ntBASIC2.82□□□□□ -1.96
CDH3P22223 HMGN2P35-201ENST00000412164 270 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.82□□□□□ -1.96
CDH3P22223 MTCO1P21-201ENST00000416634 589 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH3P22223 AL591212.2-201ENST00000433923 257 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AC107083.1-201ENST00000439643 279 ntBASIC2.82□□□□□ -1.96
CDH3P22223 MTND4P25-201ENST00000441039 533 ntBASIC2.82□□□□□ -1.96
CDH3P22223 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDH3P22223 CECR9-201ENST00000453421 199 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AC093899.1-201ENST00000457984 376 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms