Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 SNORA64.4-201ENST00000516632 81 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 RNU6-143P-201ENST00000516942 93 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 AL137161.1-201ENST00000532231 390 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.2□□□□□ -1.9
CTPS1P17812 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.2□□□□□ -1.9
CTPS1P17812 MIR5583-1-201ENST00000580941 59 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 AC107294.3-201ENST00000609211 526 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 AL442067.2-201ENST00000614033 363 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 AL138880.2-201ENST00000616214 239 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.2□□□□□ -1.9
CTPS1P17812 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.2□□□□□ -1.9
CTPS1P17812 MIR3651-201ENST00000630427 90 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 AL512643.1-201ENST00000635735 524 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTPS1P17812 CASC19-280ENST00000642102 1351 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
CTPS1P17812 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTPS1P17812 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.19□□□□□ -1.9
CTPS1P17812 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.19□□□□□ -1.9
CTPS1P17812 AL049641.1-201ENST00000441055 1948 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 Y_RNA.88-201ENST00000363029 99 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 Y_RNA.231-201ENST00000364358 102 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 RNU4-66P-201ENST00000365199 138 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 MIR514A2-201ENST00000385131 88 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 MIR514A3-201ENST00000385132 88 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.19□□□□□ -1.9
CTPS1P17812 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTPS1P17812 AL139039.1-201ENST00000401900 692 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 AL356776.1-201ENST00000406574 447 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.19□□□□□ -1.9
CTPS1P17812 AL353678.1-201ENST00000422735 741 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 GPM6BP2-201ENST00000432046 144 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.19□□□□□ -1.9
CTPS1P17812 RPL23AP22-201ENST00000437556 453 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 RPS24P13-201ENST00000442520 397 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 GPM6BP1-201ENST00000446387 144 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 MTND3P16-201ENST00000452205 344 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 RPS15AP34-201ENST00000487776 387 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 MTCYBP18-201ENST00000501056 747 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 SUMO2P6-201ENST00000505273 288 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 SNORD59.2-201ENST00000516873 68 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 SCARNA20.6-201ENST00000517251 106 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 MTND4P7-201ENST00000523876 130 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 AF235103.2-201ENST00000525753 346 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 AP000867.2-201ENST00000532468 320 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.19□□□□□ -1.9
CTPS1P17812 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CTPS1P17812 MIR3609-201ENST00000582661 80 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 MIR4424-201ENST00000585257 86 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.19□□□□□ -1.9
CTPS1P17812 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.19□□□□□ -1.9
CTPS1P17812 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CTPS1P17812 DUXAP9-208ENST00000622815 614 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 AC009033.1-201ENST00000624279 431 ntBASIC3.19□□□□□ -1.9
CTPS1P17812 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.19□□□□□ -1.9
CTPS1P17812 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.19□□□□□ -1.9
CTPS1P17812 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
CTPS1P17812 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTPS1P17812 AC073346.2-201ENST00000624724 2058 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.18□□□□□ -1.9
CTPS1P17812 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTPS1P17812 Y_RNA.157-201ENST00000363638 102 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 RNU6-38P-201ENST00000384085 107 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 RNY3P14-201ENST00000384309 102 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 RNU1-101P-201ENST00000391171 127 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 AL592114.1-201ENST00000403842 483 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTPS1P17812 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.18□□□□□ -1.9
CTPS1P17812 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.18□□□□□ -1.9
CTPS1P17812 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.18□□□□□ -1.9
CTPS1P17812 AC125238.1-201ENST00000448842 249 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 FABP5P15-201ENST00000453566 214 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.18□□□□□ -1.9
CTPS1P17812 RNU6-333P-201ENST00000459117 107 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 AC109925.1-201ENST00000478069 331 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.18□□□□□ -1.9
CTPS1P17812 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.18□□□□□ -1.9
CTPS1P17812 MTCO3P9-201ENST00000506989 781 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.18□□□□□ -1.9
CTPS1P17812 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.18□□□□□ -1.9
CTPS1P17812 IGHV3-76-201ENST00000522465 295 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.18□□□□□ -1.9
CTPS1P17812 UBL5P2-201ENST00000583788 219 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.18□□□□□ -1.9
CTPS1P17812 AC006504.8-201ENST00000621046 635 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 AC018692.3-201ENST00000623929 123 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.18□□□□□ -1.9
CTPS1P17812 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CTPS1P17812 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTPS1P17812 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTPS1P17812 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CTPS1P17812 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTPS1P17812 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
CTPS1P17812 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
CTPS1P17812 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTPS1P17812 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTPS1P17812 HSPA8P4-201ENST00000511877 1920 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms