Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
PCNAP12004 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.15□□□□□ -1.91
PCNAP12004 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCNAP12004 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.14□□□□□ -1.91
PCNAP12004 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.14□□□□□ -1.91
PCNAP12004 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
PCNAP12004 RNU6-715P-201ENST00000365204 103 ntBASIC3.14□□□□□ -1.91
PCNAP12004 U8.9-201ENST00000365667 134 ntBASIC3.14□□□□□ -1.91
PCNAP12004 Y_RNA.390-201ENST00000383932 102 ntBASIC3.14□□□□□ -1.91
PCNAP12004 SNORA75B-201ENST00000384053 137 ntBASIC3.14□□□□□ -1.91
PCNAP12004 RNU6-217P-201ENST00000384164 104 ntBASIC3.14□□□□□ -1.91
PCNAP12004 Y_RNA.573-201ENST00000384763 105 ntBASIC3.14□□□□□ -1.91
PCNAP12004 MIR578-201ENST00000384828 96 ntBASIC3.14□□□□□ -1.91
PCNAP12004 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
PCNAP12004 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.14□□□□□ -1.91
PCNAP12004 AC099548.1-201ENST00000421443 426 ntBASIC3.14□□□□□ -1.91
PCNAP12004 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.14□□□□□ -1.91
PCNAP12004 AL591704.1-201ENST00000432574 275 ntBASIC3.14□□□□□ -1.91
PCNAP12004 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.14□□□□□ -1.91
PCNAP12004 SNRPEP9-201ENST00000436794 238 ntBASIC3.14□□□□□ -1.91
PCNAP12004 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.14□□□□□ -1.91
PCNAP12004 AL590664.1-201ENST00000448065 339 ntBASIC3.14□□□□□ -1.91
PCNAP12004 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.14□□□□□ -1.91
PCNAP12004 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.14□□□□□ -1.91
PCNAP12004 MTND3P16-201ENST00000452205 344 ntBASIC3.14□□□□□ -1.91
PCNAP12004 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.14□□□□□ -1.91
PCNAP12004 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.14□□□□□ -1.91
PCNAP12004 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCNAP12004 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.14□□□□□ -1.91
PCNAP12004 RNU4-29P-201ENST00000515943 174 ntBASIC3.14□□□□□ -1.91
PCNAP12004 RNU6-1178P-201ENST00000516674 107 ntBASIC3.14□□□□□ -1.91
PCNAP12004 RNU6-1282P-201ENST00000516735 96 ntBASIC3.14□□□□□ -1.91
PCNAP12004 RNU6-1315P-201ENST00000517187 99 ntBASIC3.14□□□□□ -1.91
PCNAP12004 SCARNA20.6-201ENST00000517251 106 ntBASIC3.14□□□□□ -1.91
PCNAP12004 AP003122.3-201ENST00000526316 255 ntBASIC3.14□□□□□ -1.91
PCNAP12004 PSMA2P1-201ENST00000526365 646 ntBASIC3.14□□□□□ -1.91
PCNAP12004 AC084851.1-201ENST00000529105 249 ntBASIC3.14□□□□□ -1.91
PCNAP12004 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCNAP12004 BNIP3P6-201ENST00000549284 499 ntBASIC3.14□□□□□ -1.91
PCNAP12004 AL118558.2-201ENST00000556294 238 ntBASIC3.14□□□□□ -1.91
PCNAP12004 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
PCNAP12004 AL020991.1-201ENST00000612314 373 ntBASIC3.14□□□□□ -1.91
PCNAP12004 DISC2.1-201ENST00000612827 205 ntBASIC3.14□□□□□ -1.91
PCNAP12004 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PCNAP12004 uc_338.34-201ENST00000617467 174 ntBASIC3.14□□□□□ -1.91
PCNAP12004 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.14□□□□□ -1.91
PCNAP12004 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PCNAP12004 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCNAP12004 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PCNAP12004 OR4G1P-203ENST00000641984 1631 ntBASIC3.13□□□□□ -1.91
PCNAP12004 RNU6-799P-201ENST00000363567 107 ntBASIC3.13□□□□□ -1.91
PCNAP12004 RNU4-66P-201ENST00000365199 138 ntBASIC3.13□□□□□ -1.91
PCNAP12004 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.13□□□□□ -1.91
PCNAP12004 RNU6-1127P-201ENST00000384580 107 ntBASIC3.13□□□□□ -1.91
PCNAP12004 SNORA1.3-201ENST00000384676 136 ntBASIC3.13□□□□□ -1.91
PCNAP12004 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PCNAP12004 RNU6-193P-201ENST00000410977 107 ntBASIC3.13□□□□□ -1.91
PCNAP12004 RNA5SP344-201ENST00000411081 104 ntBASIC3.13□□□□□ -1.91
PCNAP12004 BMS1P22-201ENST00000414726 313 ntBASIC3.13□□□□□ -1.91
PCNAP12004 RPL30P16-201ENST00000419341 429 ntBASIC3.13□□□□□ -1.91
PCNAP12004 AC093151.1-201ENST00000427711 313 ntBASIC3.13□□□□□ -1.91
PCNAP12004 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.13□□□□□ -1.91
PCNAP12004 SCARNA18-201ENST00000459004 134 ntBASIC3.13□□□□□ -1.91
PCNAP12004 RPL21P41-201ENST00000459863 264 ntBASIC3.13□□□□□ -1.91
PCNAP12004 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.13□□□□□ -1.91
PCNAP12004 RPS15AP34-201ENST00000487776 387 ntBASIC3.13□□□□□ -1.91
PCNAP12004 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.13□□□□□ -1.91
PCNAP12004 HIGD1AP1-201ENST00000550979 275 ntBASIC3.13□□□□□ -1.91
PCNAP12004 AMZ2P1-203ENST00000565833 850 ntBASIC3.13□□□□□ -1.91
PCNAP12004 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.13□□□□□ -1.91
PCNAP12004 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.13□□□□□ -1.91
PCNAP12004 MIR4424-201ENST00000585257 86 ntBASIC3.13□□□□□ -1.91
PCNAP12004 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.13□□□□□ -1.91
PCNAP12004 FTX_3.1-201ENST00000610451 147 ntBASIC3.13□□□□□ -1.91
PCNAP12004 DUSP12P1-201ENST00000612874 516 ntBASIC3.13□□□□□ -1.91
PCNAP12004 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PCNAP12004 MIR6076-201ENST00000617521 113 ntBASIC3.13□□□□□ -1.91
PCNAP12004 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.13□□□□□ -1.91
PCNAP12004 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PCNAP12004 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCNAP12004 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCNAP12004 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.12□□□□□ -1.91
PCNAP12004 AC093010.3-201ENST00000570269 15214 ntBASIC3.12□□□□□ -1.91
PCNAP12004 SNORD3E-201ENST00000362899 217 ntBASIC3.12□□□□□ -1.91
PCNAP12004 RNU6-38P-201ENST00000384085 107 ntBASIC3.12□□□□□ -1.91
PCNAP12004 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCNAP12004 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCNAP12004 RNU6-1025P-201ENST00000410629 104 ntBASIC3.12□□□□□ -1.91
PCNAP12004 RPL21P90-201ENST00000415692 466 ntBASIC3.12□□□□□ -1.91
PCNAP12004 AL158156.1-201ENST00000422509 473 ntBASIC3.12□□□□□ -1.91
PCNAP12004 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.12□□□□□ -1.91
PCNAP12004 AL669831.1-202ENST00000428504 417 ntBASIC3.12□□□□□ -1.91
PCNAP12004 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCNAP12004 AC005019.1-201ENST00000436455 431 ntBASIC3.12□□□□□ -1.91
PCNAP12004 HMGB1P31-201ENST00000437242 427 ntBASIC3.12□□□□□ -1.91
PCNAP12004 GTF2IP13-201ENST00000438487 386 ntBASIC3.12□□□□□ -1.91
PCNAP12004 AL360271.2-201ENST00000447710 161 ntBASIC3.12□□□□□ -1.91
PCNAP12004 RPS15AP27-201ENST00000449183 343 ntBASIC3.12□□□□□ -1.91
PCNAP12004 RNU6-333P-201ENST00000459117 107 ntBASIC3.12□□□□□ -1.91
PCNAP12004 AC022493.1-201ENST00000492984 337 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms