Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 UBA52P6-201ENST00000399822 382 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 TMSB10P2-201ENST00000416049 131 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFAP04085 AC011742.1-201ENST00000431448 434 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 AC016700.2-201ENST00000446011 156 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 HMGB3P8-201ENST00000449709 577 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 AL138752.1-201ENST00000452964 351 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 SCARNA24.2-201ENST00000516968 130 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 TOMM20P2-201ENST00000540082 421 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFAP04085 MIR4277-201ENST00000578298 84 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFAP04085 AC020895.1-201ENST00000595362 272 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 AL356157.2-201ENST00000605122 111 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 FTX_2.1-201ENST00000618816 94 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 BX005214.3-202ENST00000619809 325 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.55□□□□□ -1.68
PDGFAP04085 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.55□□□□□ -1.68
PDGFAP04085 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFAP04085 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFAP04085 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDGFAP04085 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.55□□□□□ -1.68
PDGFAP04085 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.55□□□□□ -1.68
PDGFAP04085 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.55□□□□□ -1.68
PDGFAP04085 USP8P1-201ENST00000494673 3183 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFAP04085 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
PDGFAP04085 AL590240.1-201ENST00000334118 313 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 RNA5SP28-201ENST00000363841 119 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 RNU6-879P-201ENST00000364328 108 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 SNORD116-20-201ENST00000384529 92 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 RNU1-139P-201ENST00000391307 165 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 RNU2-20P-201ENST00000410425 191 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 BX510359.2-201ENST00000417920 305 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.54□□□□□ -1.68
PDGFAP04085 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFAP04085 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFAP04085 RPS15AP7-201ENST00000439294 405 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFAP04085 AP000873.1-201ENST00000463987 400 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 AC087477.1-201ENST00000465747 340 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 RPL30P1-201ENST00000488676 339 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 AC093840.1-201ENST00000511599 336 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 RNU6-1114P-201ENST00000516022 107 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 RNU6-496P-201ENST00000516145 99 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 AP006245.1-201ENST00000522549 120 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFAP04085 AC016256.1-201ENST00000547971 354 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 AC011476.5-201ENST00000615594 130 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFAP04085 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFAP04085 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.54□□□□□ -1.68
PDGFAP04085 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
PDGFAP04085 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.54□□□□□ -1.68
PDGFAP04085 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFAP04085 AL138820.1-201ENST00000617901 5305 ntBASIC4.54□□□□□ -1.68
PDGFAP04085 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFAP04085 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFAP04085 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFAP04085 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
PDGFAP04085 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFAP04085 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFAP04085 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFAP04085 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFAP04085 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFAP04085 RNU4-90P-201ENST00000362773 141 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 Y_RNA.200-201ENST00000364018 102 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 Y_RNA.270-201ENST00000364693 104 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 Y_RNA.274-201ENST00000364714 101 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 RNU6-290P-201ENST00000365212 101 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 RNA5SP167-201ENST00000365461 116 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFAP04085 SNORD63-201ENST00000384262 68 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 MIR888-201ENST00000401186 77 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 AL033519.2-201ENST00000403958 392 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 RNA5SP129-201ENST00000410276 118 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 EIF1P2-201ENST00000428233 350 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 RPS29P9-201ENST00000440360 171 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 AL031659.1-201ENST00000447075 539 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.53□□□□□ -1.68
PDGFAP04085 AL136097.1-201ENST00000456945 913 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 AC120057.2-201ENST00000571520 271 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFAP04085 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.53□□□□□ -1.68
PDGFAP04085 AC004792.1-201ENST00000614523 137 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 U2.14-201ENST00000615943 113 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 MIR6134-201ENST00000617606 109 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 AC137590.2-201ENST00000619709 240 ntBASIC4.53□□□□□ -1.68
PDGFAP04085 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFAP04085 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.53□□□□□ -1.68
PDGFAP04085 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PDGFAP04085 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.53□□□□□ -1.68
PDGFAP04085 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFAP04085 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
PDGFAP04085 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PDGFAP04085 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.53□□□□□ -1.68
PDGFAP04085 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.53□□□□□ -1.68
PDGFAP04085 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFAP04085 ZNF826P-207ENST00000622273 1910 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms