Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 RNU6-39P-201ENST00000384344 107 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 MIR196B-201ENST00000384852 84 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 MIR218-1-201ENST00000384999 110 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 RNU6-220P-201ENST00000390919 107 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AL031577.2-201ENST00000404133 280 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC114491.1-201ENST00000416095 246 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 MTND4P20-201ENST00000424125 869 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 SRIP2-201ENST00000428470 166 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 MTND5P25-201ENST00000430499 799 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC004383.1-201ENST00000438135 289 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC107083.1-201ENST00000439643 279 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 BRK1P2-201ENST00000442875 223 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC128713.1-201ENST00000471495 306 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 RPS3AP22-201ENST00000488297 769 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC079804.2-201ENST00000490376 200 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC097462.2-201ENST00000504623 481 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 RNU6-572P-201ENST00000516724 80 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 Y_RNA.717-201ENST00000517106 92 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC022878.1-201ENST00000530684 149 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC135628.1-201ENST00000568867 534 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC105137.2-201ENST00000569073 466 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 NRBF2P1-201ENST00000587407 859 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 ELOCP29-201ENST00000588193 334 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC012065.4-201ENST00000602445 679 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC112191.3-201ENST00000604371 277 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 OR2AS2P-201ENST00000606902 342 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 MIR15A-201ENST00000607334 83 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AF246928.1-201ENST00000623768 87 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 AC092608.2-201ENST00000624427 218 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 MTND4P27-201ENST00000450813 1354 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AL596028.1-201ENST00000326971 197 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 HSPE1P11-201ENST00000339579 310 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 RNU4-72P-201ENST00000410754 173 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 Z99497.1-201ENST00000421282 135 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC119618.1-201ENST00000434191 222 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 TAF9P1-201ENST00000445421 515 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 IFNA11P-201ENST00000446352 526 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC092001.1-201ENST00000453012 261 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 ART2BP-201ENST00000453501 499 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 TAF9P2-201ENST00000454958 515 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 SNORD109B-201ENST00000458961 67 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 SNORD109A-201ENST00000459128 67 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC007182.2-201ENST00000489251 402 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC109927.2-201ENST00000506416 303 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC096725.1-201ENST00000514266 313 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 RNU6-677P-201ENST00000516914 101 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 SNORD19.2-201ENST00000516978 73 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 SNORA31.18-201ENST00000517043 134 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC011979.2-201ENST00000527568 352 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 MIR3915-201ENST00000578518 97 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 MIR4658-201ENST00000584344 65 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AL359999.1-201ENST00000604513 294 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AP002360.4-201ENST00000606980 481 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC135507.1-201ENST00000607214 561 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AC007494.3-201ENST00000624660 743 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 CU459211.1-201ENST00000635667 749 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 AL137003.2-201ENST00000606924 2538 ntBASIC1.76□□□□□ -2.13
HLA-DQA1P01909 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DQA1P01909 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 RNU6-898P-201ENST00000365627 104 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 RNU6-1083P-201ENST00000384022 107 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 RNU1-52P-201ENST00000384190 164 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 RNU6-19P-201ENST00000384718 107 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 MIR9-1-201ENST00000385198 89 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AL139039.1-201ENST00000401900 692 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 MRPL42P2-201ENST00000403169 426 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms