Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 CALM2P2-201ENST00000428512 440 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.93□□□□□ -1.94
LMX1BO60663 SAR1AP4-201ENST00000429225 591 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.93□□□□□ -1.94
LMX1BO60663 RPL26P6-201ENST00000440913 438 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.93□□□□□ -1.94
LMX1BO60663 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.93□□□□□ -1.94
LMX1BO60663 RPS15AP27-201ENST00000449183 343 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC006539.3-201ENST00000454258 129 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.93□□□□□ -1.94
LMX1BO60663 RPL23AP14-201ENST00000468281 468 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 HMGN1P10-201ENST00000474557 553 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AL049873.1-201ENST00000480540 376 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.93□□□□□ -1.94
LMX1BO60663 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 Y_RNA.654-201ENST00000497848 106 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LMX1BO60663 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.93□□□□□ -1.94
LMX1BO60663 AC104027.1-201ENST00000521887 300 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.93□□□□□ -1.94
LMX1BO60663 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.93□□□□□ -1.94
LMX1BO60663 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LMX1BO60663 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.93□□□□□ -1.94
LMX1BO60663 AC093012.1-202ENST00000549403 582 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AL121603.1-201ENST00000553815 142 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC006270.2-201ENST00000578523 652 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.93□□□□□ -1.94
LMX1BO60663 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.93□□□□□ -1.94
LMX1BO60663 AC012493.2-201ENST00000595083 291 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC012409.4-201ENST00000612923 249 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC093913.1-201ENST00000614178 329 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 U73479.1-201ENST00000618062 168 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LMX1BO60663 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
LMX1BO60663 AP001148.1-201ENST00000624124 2359 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LMX1BO60663 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LMX1BO60663 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LMX1BO60663 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LMX1BO60663 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.92□□□□□ -1.94
LMX1BO60663 HSPA8P4-201ENST00000511877 1920 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AL079305.1-201ENST00000623159 3008 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
LMX1BO60663 RNU6-1287P-201ENST00000362914 107 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 RNU6-82P-201ENST00000363970 107 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 SNORA36C-201ENST00000384289 132 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 RNU6-1060P-201ENST00000384664 107 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 SNORD17-201ENST00000390930 237 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 SNORA16.2-201ENST00000390991 127 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 SNORA48.5-201ENST00000391143 135 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 U3.26-201ENST00000391236 204 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 RNU4-46P-201ENST00000410818 138 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 RNU6-387P-201ENST00000411331 105 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.92□□□□□ -1.94
LMX1BO60663 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.92□□□□□ -1.94
LMX1BO60663 AC244098.2-201ENST00000422068 99 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 MTATP6P4-201ENST00000427725 675 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AC005534.2-201ENST00000431047 433 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.92□□□□□ -1.94
LMX1BO60663 SCARNA18-201ENST00000459004 134 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 SNORD19B-201ENST00000459623 84 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AP001486.1-201ENST00000463339 476 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 RPL23AP67-201ENST00000465341 474 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 SNRPGP3-201ENST00000469405 227 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 RN7SL330P-201ENST00000469709 307 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 HMGB1P22-201ENST00000505315 124 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.92□□□□□ -1.94
LMX1BO60663 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.92□□□□□ -1.94
LMX1BO60663 RNU6-123P-201ENST00000516163 102 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 RN7SKP289-201ENST00000517244 295 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.92□□□□□ -1.94
LMX1BO60663 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.92□□□□□ -1.94
LMX1BO60663 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.92□□□□□ -1.94
LMX1BO60663 AP004242.1-201ENST00000533701 349 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.92□□□□□ -1.94
LMX1BO60663 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.92□□□□□ -1.94
LMX1BO60663 OR4H12P-201ENST00000556269 907 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 MTCO3P23-201ENST00000561363 289 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.92□□□□□ -1.94
LMX1BO60663 MIR5047-201ENST00000579212 100 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 MIR3672-201ENST00000584290 82 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 DPPA3P3-201ENST00000603842 430 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 YPEL5P2-201ENST00000605553 359 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.92□□□□□ -1.94
LMX1BO60663 AL365204.3-201ENST00000612448 685 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AC103705.1-201ENST00000619013 241 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.92□□□□□ -1.94
LMX1BO60663 AC007998.5-201ENST00000622938 237 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.92□□□□□ -1.94
LMX1BO60663 U6.98-201ENST00000637157 84 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
LMX1BO60663 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.92□□□□□ -1.94
LMX1BO60663 AF127577.6-201ENST00000623352 2191 ntBASIC2.92□□□□□ -1.94
LMX1BO60663 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LMX1BO60663 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LMX1BO60663 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LMX1BO60663 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
LMX1BO60663 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
LMX1BO60663 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms