Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.88□□□□□ -1.95
PRKNO60260 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.88□□□□□ -1.95
PRKNO60260 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.88□□□□□ -1.95
PRKNO60260 MIR4325-201ENST00000583049 90 ntBASIC2.88□□□□□ -1.95
PRKNO60260 AC174048.1-201ENST00000603389 144 ntBASIC2.88□□□□□ -1.95
PRKNO60260 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.88□□□□□ -1.95
PRKNO60260 AL390240.1-201ENST00000612950 384 ntBASIC2.88□□□□□ -1.95
PRKNO60260 AC034102.8-201ENST00000615146 484 ntBASIC2.88□□□□□ -1.95
PRKNO60260 AC092794.2-201ENST00000620933 563 ntBASIC2.88□□□□□ -1.95
PRKNO60260 AC099506.2-201ENST00000623074 221 ntBASIC2.88□□□□□ -1.95
PRKNO60260 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.88□□□□□ -1.95
PRKNO60260 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PRKNO60260 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
PRKNO60260 AC103710.2-202ENST00000641454 2853 ntBASIC2.87□□□□□ -1.95
PRKNO60260 SRP72P2-201ENST00000344851 1979 ntBASIC2.87□□□□□ -1.95
PRKNO60260 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
PRKNO60260 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PRKNO60260 UBE2L2-201ENST00000254302 429 ntBASIC2.87□□□□□ -1.95
PRKNO60260 RNU1-75P-201ENST00000347264 129 ntBASIC2.87□□□□□ -1.95
PRKNO60260 MIR422A-201ENST00000362286 90 ntBASIC2.87□□□□□ -1.95
PRKNO60260 RNU6-512P-201ENST00000364438 103 ntBASIC2.87□□□□□ -1.95
PRKNO60260 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.87□□□□□ -1.95
PRKNO60260 RNU4-46P-201ENST00000410818 138 ntBASIC2.87□□□□□ -1.95
PRKNO60260 RPL21P111-201ENST00000418453 477 ntBASIC2.87□□□□□ -1.95
PRKNO60260 YPEL5P1-201ENST00000419731 367 ntBASIC2.87□□□□□ -1.95
PRKNO60260 NDUFB4P7-201ENST00000423198 363 ntBASIC2.87□□□□□ -1.95
PRKNO60260 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.87□□□□□ -1.95
PRKNO60260 CBWD4P-201ENST00000445695 655 ntBASIC2.87□□□□□ -1.95
PRKNO60260 SSXP4-201ENST00000451349 245 ntBASIC2.87□□□□□ -1.95
PRKNO60260 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.87□□□□□ -1.95
PRKNO60260 RPL37P6-201ENST00000460682 294 ntBASIC2.87□□□□□ -1.95
PRKNO60260 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.87□□□□□ -1.95
PRKNO60260 AC114786.4-201ENST00000508771 728 ntBASIC2.87□□□□□ -1.95
PRKNO60260 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.87□□□□□ -1.95
PRKNO60260 RNU6-1038P-201ENST00000516516 104 ntBASIC2.87□□□□□ -1.95
PRKNO60260 SCARNA13-201ENST00000516672 275 ntBASIC2.87□□□□□ -1.95
PRKNO60260 CENPUP1-201ENST00000526649 1202 ntBASIC2.87□□□□□ -1.95
PRKNO60260 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.87□□□□□ -1.95
PRKNO60260 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.87□□□□□ -1.95
PRKNO60260 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.87□□□□□ -1.95
PRKNO60260 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.87□□□□□ -1.95
PRKNO60260 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.87□□□□□ -1.95
PRKNO60260 AC013553.2-201ENST00000604244 589 ntBASIC2.87□□□□□ -1.95
PRKNO60260 AL162274.2-201ENST00000614406 332 ntBASIC2.87□□□□□ -1.95
PRKNO60260 uc_338.34-201ENST00000617467 174 ntBASIC2.87□□□□□ -1.95
PRKNO60260 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.87□□□□□ -1.95
PRKNO60260 AC073476.4-201ENST00000628409 72 ntBASIC2.87□□□□□ -1.95
PRKNO60260 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PRKNO60260 AC008568.2-201ENST00000623862 2313 ntBASIC2.87□□□□□ -1.95
PRKNO60260 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
PRKNO60260 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PRKNO60260 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PRKNO60260 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PRKNO60260 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
PRKNO60260 Y_RNA.157-201ENST00000363638 102 ntBASIC2.86□□□□□ -1.95
PRKNO60260 Y_RNA.231-201ENST00000364358 102 ntBASIC2.86□□□□□ -1.95
PRKNO60260 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.86□□□□□ -1.95
PRKNO60260 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
PRKNO60260 RNU6-38P-201ENST00000384085 107 ntBASIC2.86□□□□□ -1.95
PRKNO60260 SNORD15B-201ENST00000384714 146 ntBASIC2.86□□□□□ -1.95
PRKNO60260 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PRKNO60260 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.86□□□□□ -1.95
PRKNO60260 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.86□□□□□ -1.95
PRKNO60260 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.86□□□□□ -1.95
PRKNO60260 Z85995.1-201ENST00000415547 335 ntBASIC2.86□□□□□ -1.95
PRKNO60260 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.86□□□□□ -1.95
PRKNO60260 AC104058.1-201ENST00000448028 297 ntBASIC2.86□□□□□ -1.95
PRKNO60260 MTND5P20-201ENST00000448677 143 ntBASIC2.86□□□□□ -1.95
PRKNO60260 RPL37P4-201ENST00000448908 268 ntBASIC2.86□□□□□ -1.95
PRKNO60260 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.86□□□□□ -1.95
PRKNO60260 RNU6-333P-201ENST00000459117 107 ntBASIC2.86□□□□□ -1.95
PRKNO60260 RPL39P36-201ENST00000490784 156 ntBASIC2.86□□□□□ -1.95
PRKNO60260 AC008628.2-201ENST00000502605 298 ntBASIC2.86□□□□□ -1.95
PRKNO60260 MTCO2P30-201ENST00000503662 364 ntBASIC2.86□□□□□ -1.95
PRKNO60260 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.86□□□□□ -1.95
PRKNO60260 MTCO3P9-201ENST00000506989 781 ntBASIC2.86□□□□□ -1.95
PRKNO60260 RNU6-507P-201ENST00000516045 100 ntBASIC2.86□□□□□ -1.95
PRKNO60260 Y_RNA.702-201ENST00000516843 96 ntBASIC2.86□□□□□ -1.95
PRKNO60260 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.86□□□□□ -1.95
PRKNO60260 IGHV3-76-201ENST00000522465 295 ntBASIC2.86□□□□□ -1.95
PRKNO60260 MTND4P7-201ENST00000523876 130 ntBASIC2.86□□□□□ -1.95
PRKNO60260 AP001804.3-201ENST00000525146 880 ntBASIC2.86□□□□□ -1.95
PRKNO60260 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.86□□□□□ -1.95
PRKNO60260 AL163153.1-201ENST00000554223 283 ntBASIC2.86□□□□□ -1.95
PRKNO60260 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.86□□□□□ -1.95
PRKNO60260 MIR4424-201ENST00000585257 86 ntBASIC2.86□□□□□ -1.95
PRKNO60260 BNIP3P9-201ENST00000603714 553 ntBASIC2.86□□□□□ -1.95
PRKNO60260 AC098826.3-201ENST00000603823 466 ntBASIC2.86□□□□□ -1.95
PRKNO60260 AL138889.2-201ENST00000603883 242 ntBASIC2.86□□□□□ -1.95
PRKNO60260 RNU6-89P-201ENST00000606519 100 ntBASIC2.86□□□□□ -1.95
PRKNO60260 MIR15A-201ENST00000607334 83 ntBASIC2.86□□□□□ -1.95
PRKNO60260 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.86□□□□□ -1.95
PRKNO60260 AC090617.10-201ENST00000624308 134 ntBASIC2.86□□□□□ -1.95
PRKNO60260 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
PRKNO60260 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PRKNO60260 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PRKNO60260 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PRKNO60260 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
PRKNO60260 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PRKNO60260 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms