Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRPF3O43395 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRPF3O43395 OR4G1P-203ENST00000641984 1631 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.81□□□□□ -1.8
PRPF3O43395 ASNSP3-201ENST00000451989 1306 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 AC008669.1-201ENST00000565823 2178 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 RNU6-778P-201ENST00000363269 103 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 Y_RNA.231-201ENST00000364358 102 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 SNORA14A-201ENST00000364773 135 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
PRPF3O43395 RNU6-45P-201ENST00000384471 107 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 SNORA40C-201ENST00000391285 128 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 EI24P2-201ENST00000397776 1076 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRPF3O43395 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.81□□□□□ -1.8
PRPF3O43395 AL627311.1-201ENST00000431514 115 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 AL714022.1-201ENST00000439897 151 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 AL078601.1-201ENST00000444542 271 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 WASF1P1-201ENST00000447560 1131 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 snoU13.28-201ENST00000459235 104 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.81□□□□□ -1.8
PRPF3O43395 AC069439.1-201ENST00000494739 167 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 PRDX4P1-201ENST00000507189 574 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.81□□□□□ -1.8
PRPF3O43395 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.81□□□□□ -1.8
PRPF3O43395 SUB1P1-201ENST00000524415 382 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 AC011611.1-201ENST00000552179 197 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.81□□□□□ -1.8
PRPF3O43395 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.81□□□□□ -1.8
PRPF3O43395 AL020991.1-201ENST00000612314 373 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 AC022418.1-201ENST00000624118 445 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.81□□□□□ -1.8
PRPF3O43395 AC110774.1-201ENST00000623567 2018 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 AC007496.3-201ENST00000624987 3443 ntBASIC3.81□□□□□ -1.8
PRPF3O43395 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PRPF3O43395 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRPF3O43395 HSPA8P4-201ENST00000511877 1920 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF3O43395 RNU6-715P-201ENST00000365204 103 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF3O43395 MIR483-201ENST00000385070 76 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 MIR34A-201ENST00000385130 110 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 MIR514A2-201ENST00000385131 88 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 MIR514A3-201ENST00000385132 88 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 RNA5SP229-201ENST00000410809 99 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 OR9R1P-201ENST00000412200 877 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 AL353621.1-201ENST00000418219 243 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF3O43395 SRIP2-201ENST00000428470 166 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 MYL8P-204ENST00000431574 518 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 AC098831.1-201ENST00000440661 216 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 AC006539.3-201ENST00000454258 129 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF3O43395 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.8□□□□□ -1.8
PRPF3O43395 AC116353.2-201ENST00000505332 712 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 AC074344.1-201ENST00000512823 224 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 RNU1-103P-201ENST00000516502 125 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 SNORA31.21-201ENST00000517180 77 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 AC009902.1-201ENST00000519351 183 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF3O43395 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.8□□□□□ -1.8
PRPF3O43395 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.8□□□□□ -1.8
PRPF3O43395 AL391261.3-201ENST00000557194 520 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF3O43395 AL162713.1-201ENST00000604480 262 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 AC007938.3-201ENST00000604965 623 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 RMST_4.1-201ENST00000616886 107 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF3O43395 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF3O43395 AC110491.1-201ENST00000562191 2010 ntBASIC3.8□□□□□ -1.8
PRPF3O43395 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF3O43395 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF3O43395 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF3O43395 Y_RNA.100-201ENST00000363141 102 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 RNU6-884P-201ENST00000363889 107 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 RNA5SP139-201ENST00000364340 117 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 RNU4-66P-201ENST00000365199 138 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 SNORD70.1-201ENST00000391007 85 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF3O43395 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF3O43395 AC009161.1-201ENST00000417306 376 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 AC245291.1-201ENST00000419501 328 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 MTND4LP11-201ENST00000422184 280 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF3O43395 AL353729.1-201ENST00000425044 720 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 TOMM20P4-201ENST00000427861 435 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 ARF4P2-201ENST00000430209 526 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 NEK4P1-201ENST00000433383 879 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 ERLEC1P1-201ENST00000433806 578 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF3O43395 HMGB1P31-201ENST00000437242 427 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 RPS15AP27-201ENST00000449183 343 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 MTND3P16-201ENST00000452205 344 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 RNU7-167P-201ENST00000459160 62 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 RN7SL330P-201ENST00000469709 307 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 RPL7P49-201ENST00000471402 708 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 RPS29P25-201ENST00000481709 171 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 Y_RNA.654-201ENST00000497848 106 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms