Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SRGAP3O43295 USP9YP30-201ENST00000430729 455 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 AL365440.1-201ENST00000436135 2167 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.42□□□□□ -1.7
SRGAP3O43295 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.42□□□□□ -1.7
SRGAP3O43295 RPL37P6-202ENST00000464216 403 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 AC092451.1-201ENST00000480211 153 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 AC096745.1-201ENST00000509945 370 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 RNA5SP384-201ENST00000516615 116 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.42□□□□□ -1.7
SRGAP3O43295 GNAI2P1-201ENST00000541815 315 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SRGAP3O43295 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.42□□□□□ -1.7
SRGAP3O43295 AC004696.1-201ENST00000614345 607 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 AP003355.3-201ENST00000623465 114 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 MIR4496-201ENST00000635896 61 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 HSPA8P4-201ENST00000511877 1920 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SRGAP3O43295 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SRGAP3O43295 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SRGAP3O43295 PABPC1P7-201ENST00000413177 1513 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRGAP3O43295 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRGAP3O43295 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SRGAP3O43295 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SRGAP3O43295 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SRGAP3O43295 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRGAP3O43295 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRGAP3O43295 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRGAP3O43295 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SRGAP3O43295 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.41□□□□□ -1.7
SRGAP3O43295 SNORA71.3-201ENST00000362582 128 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 RNU6-214P-201ENST00000384130 107 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 MIR449B-201ENST00000384995 97 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 Z98941.1-201ENST00000407764 100 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 MIR1250-201ENST00000408098 113 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 U3.39-201ENST00000408569 239 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 RNU6-101P-201ENST00000410323 104 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 RNU4-78P-201ENST00000410940 126 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.41□□□□□ -1.7
SRGAP3O43295 CRYBB2P1-203ENST00000415709 538 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 AC017079.2-201ENST00000416102 485 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 AC073063.1-201ENST00000434352 607 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 AL359672.1-201ENST00000442302 409 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 ANP32BP2-201ENST00000454525 545 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.41□□□□□ -1.7
SRGAP3O43295 RPL21P103-201ENST00000479921 488 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.41□□□□□ -1.7
SRGAP3O43295 AC116655.1-201ENST00000508324 901 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 RN7SKP82-201ENST00000516786 223 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 RNU6-677P-201ENST00000516914 101 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.41□□□□□ -1.7
SRGAP3O43295 CYCSP27-201ENST00000527643 293 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 AP003385.6-201ENST00000531603 374 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 MIR4716-201ENST00000579628 84 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 AC011494.1-201ENST00000596454 237 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.41□□□□□ -1.7
SRGAP3O43295 AL161423.1-201ENST00000613700 262 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 AC243312.2-201ENST00000623340 601 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SRGAP3O43295 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
SRGAP3O43295 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRGAP3O43295 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SRGAP3O43295 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.41□□□□□ -1.7
SRGAP3O43295 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.41□□□□□ -1.7
SRGAP3O43295 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRGAP3O43295 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.41□□□□□ -1.7
SRGAP3O43295 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SRGAP3O43295 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
SRGAP3O43295 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.4□□□□□ -1.7
SRGAP3O43295 OTUD4P1-201ENST00000237841 3067 ntBASIC4.4□□□□□ -1.7
SRGAP3O43295 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SRGAP3O43295 RNU6-1059P-201ENST00000363752 98 ntBASIC4.4□□□□□ -1.71
SRGAP3O43295 SNORA23-201ENST00000365128 182 ntBASIC4.4□□□□□ -1.71
SRGAP3O43295 MIR23B-201ENST00000384832 97 ntBASIC4.4□□□□□ -1.71
SRGAP3O43295 MIR218-2-201ENST00000385006 110 ntBASIC4.4□□□□□ -1.71
SRGAP3O43295 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.4□□□□□ -1.71
SRGAP3O43295 RNU6-293P-201ENST00000411259 106 ntBASIC4.4□□□□□ -1.71
SRGAP3O43295 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.4□□□□□ -1.71
SRGAP3O43295 RPL7P23-201ENST00000493874 747 ntBASIC4.4□□□□□ -1.71
SRGAP3O43295 RNU6-307P-201ENST00000516743 106 ntBASIC4.4□□□□□ -1.71
SRGAP3O43295 AP006587.4-201ENST00000526053 529 ntBASIC4.4□□□□□ -1.71
SRGAP3O43295 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.4□□□□□ -1.71
SRGAP3O43295 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.4□□□□□ -1.71
SRGAP3O43295 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.4□□□□□ -1.71
SRGAP3O43295 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.4□□□□□ -1.71
SRGAP3O43295 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.4□□□□□ -1.71
SRGAP3O43295 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.4□□□□□ -1.71
SRGAP3O43295 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SRGAP3O43295 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SRGAP3O43295 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.4□□□□□ -1.71
SRGAP3O43295 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SRGAP3O43295 PHKBP1-201ENST00000450951 1951 ntBASIC4.4□□□□□ -1.71
SRGAP3O43295 AC091812.1-201ENST00000432235 1948 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.39□□□□□ -1.71
SRGAP3O43295 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SRGAP3O43295 RNU1-115P-201ENST00000365329 160 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 Y_RNA.512-201ENST00000384518 102 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 MIR135A2-201ENST00000384854 100 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 MIR3074-201ENST00000384885 81 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms