Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MIR3199-2-201ENST00000636243 86 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AC006927.3-201ENST00000638789 384 ntBASIC2.34□□□□□ -2.03
MSH4O15457 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
MSH4O15457 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.34□□□□□ -2.03
MSH4O15457 MTND4P35-201ENST00000604257 1375 ntBASIC2.34□□□□□ -2.04
MSH4O15457 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MSH4O15457 AL137003.2-201ENST00000606924 2538 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AC135776.4-201ENST00000624300 1904 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AC010889.1-201ENST00000566193 2666 ntBASIC2.33□□□□□ -2.04
MSH4O15457 RNU6-533P-201ENST00000384144 107 ntBASIC2.33□□□□□ -2.04
MSH4O15457 RNU6-658P-201ENST00000384606 106 ntBASIC2.33□□□□□ -2.04
MSH4O15457 RNU6-14P-201ENST00000384630 106 ntBASIC2.33□□□□□ -2.04
MSH4O15457 RNU2-36P-201ENST00000410361 191 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.33□□□□□ -2.04
MSH4O15457 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.33□□□□□ -2.04
MSH4O15457 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.33□□□□□ -2.04
MSH4O15457 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.33□□□□□ -2.04
MSH4O15457 SSXP1-201ENST00000453640 473 ntBASIC2.33□□□□□ -2.04
MSH4O15457 SNORD97-201ENST00000459187 142 ntBASIC2.33□□□□□ -2.04
MSH4O15457 snoU13.26-201ENST00000459452 105 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AC139453.3-201ENST00000493276 369 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AC112204.1-201ENST00000502591 103 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AC092436.1-201ENST00000506450 503 ntBASIC2.33□□□□□ -2.04
MSH4O15457 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
MSH4O15457 RN7SKP287-201ENST00000516546 266 ntBASIC2.33□□□□□ -2.04
MSH4O15457 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.33□□□□□ -2.04
MSH4O15457 AC107934.1-201ENST00000522215 217 ntBASIC2.33□□□□□ -2.04
MSH4O15457 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.33□□□□□ -2.04
MSH4O15457 AC009094.1-201ENST00000564443 426 ntBASIC2.33□□□□□ -2.04
MSH4O15457 MIR3117-201ENST00000584034 78 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AL670379.6-201ENST00000603753 252 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AL670379.11-201ENST00000604059 253 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AC008162.1-201ENST00000604718 254 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AL670379.1-201ENST00000604752 252 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AL670379.5-201ENST00000605253 252 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AL670379.12-201ENST00000605291 253 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AL670379.8-201ENST00000605353 252 ntBASIC2.33□□□□□ -2.04
MSH4O15457 AL670379.7-201ENST00000605823 252 ntBASIC2.33□□□□□ -2.04
MSH4O15457 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.33□□□□□ -2.04
MSH4O15457 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.33□□□□□ -2.04
MSH4O15457 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.33□□□□□ -2.04
MSH4O15457 AC092104.1-201ENST00000497346 1441 ntBASIC2.33□□□□□ -2.04
MSH4O15457 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.32□□□□□ -2.04
MSH4O15457 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.32□□□□□ -2.04
MSH4O15457 AC006366.1-201ENST00000422002 759 ntBASIC2.32□□□□□ -2.04
MSH4O15457 OSTCP8-201ENST00000445117 448 ntBASIC2.32□□□□□ -2.04
MSH4O15457 FTH1P25-201ENST00000447665 469 ntBASIC2.32□□□□□ -2.04
MSH4O15457 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.32□□□□□ -2.04
MSH4O15457 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.32□□□□□ -2.04
MSH4O15457 snoU13.15-201ENST00000459407 104 ntBASIC2.32□□□□□ -2.04
MSH4O15457 EIF4EP3-201ENST00000498782 656 ntBASIC2.32□□□□□ -2.04
MSH4O15457 SCARNA11.3-201ENST00000517276 130 ntBASIC2.32□□□□□ -2.04
MSH4O15457 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.32□□□□□ -2.04
MSH4O15457 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.32□□□□□ -2.04
MSH4O15457 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.32□□□□□ -2.04
MSH4O15457 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.32□□□□□ -2.04
MSH4O15457 MIR3616-201ENST00000584070 92 ntBASIC2.32□□□□□ -2.04
MSH4O15457 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
MSH4O15457 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.32□□□□□ -2.04
MSH4O15457 AL358072.1-201ENST00000604156 575 ntBASIC2.32□□□□□ -2.04
MSH4O15457 AC011890.2-201ENST00000613393 294 ntBASIC2.32□□□□□ -2.04
MSH4O15457 Y_RNA.783-201ENST00000613546 102 ntBASIC2.32□□□□□ -2.04
MSH4O15457 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.32□□□□□ -2.04
MSH4O15457 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.32□□□□□ -2.04
MSH4O15457 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.32□□□□□ -2.04
MSH4O15457 FRG1KP-201ENST00000623592 341 ntBASIC2.32□□□□□ -2.04
MSH4O15457 AC091953.2-201ENST00000623979 160 ntBASIC2.32□□□□□ -2.04
MSH4O15457 AC017037.3-201ENST00000625016 472 ntBASIC2.32□□□□□ -2.04
MSH4O15457 AC004520.1-201ENST00000608362 1413 ntBASIC2.32□□□□□ -2.04
MSH4O15457 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.32□□□□□ -2.04
MSH4O15457 ADAM3A-203ENST00000461344 2157 ntBASIC2.32□□□□□ -2.04
MSH4O15457 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
MSH4O15457 RNU6-511P-201ENST00000363496 107 ntBASIC2.31□□□□□ -2.04
MSH4O15457 RNU6-288P-201ENST00000363690 104 ntBASIC2.31□□□□□ -2.04
MSH4O15457 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
MSH4O15457 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.31□□□□□ -2.04
MSH4O15457 RNU6-817P-201ENST00000391083 104 ntBASIC2.31□□□□□ -2.04
MSH4O15457 MTCYBP36-201ENST00000404146 440 ntBASIC2.31□□□□□ -2.04
MSH4O15457 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.31□□□□□ -2.04
MSH4O15457 RPS15AP12-201ENST00000419498 388 ntBASIC2.31□□□□□ -2.04
MSH4O15457 BX276092.3-201ENST00000424182 230 ntBASIC2.31□□□□□ -2.04
MSH4O15457 AC093106.2-201ENST00000428212 385 ntBASIC2.31□□□□□ -2.04
MSH4O15457 AL592045.1-201ENST00000429867 352 ntBASIC2.31□□□□□ -2.04
MSH4O15457 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
MSH4O15457 AL512286.1-201ENST00000439244 400 ntBASIC2.31□□□□□ -2.04
MSH4O15457 AL445687.1-201ENST00000439946 251 ntBASIC2.31□□□□□ -2.04
MSH4O15457 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.31□□□□□ -2.04
MSH4O15457 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.31□□□□□ -2.04
MSH4O15457 RPL37P25-201ENST00000507308 276 ntBASIC2.31□□□□□ -2.04
MSH4O15457 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.31□□□□□ -2.04
MSH4O15457 AC022447.1-201ENST00000515358 464 ntBASIC2.31□□□□□ -2.04
MSH4O15457 RNU5F-8P-201ENST00000515941 111 ntBASIC2.31□□□□□ -2.04
MSH4O15457 RNU6-1129P-201ENST00000515964 104 ntBASIC2.31□□□□□ -2.04
MSH4O15457 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.31□□□□□ -2.04
MSH4O15457 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.31□□□□□ -2.04
MSH4O15457 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.31□□□□□ -2.04
MSH4O15457 AP000873.5-201ENST00000533906 236 ntBASIC2.31□□□□□ -2.04
MSH4O15457 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.31□□□□□ -2.04
MSH4O15457 AC007151.1-201ENST00000572774 483 ntBASIC2.31□□□□□ -2.04
MSH4O15457 AC104763.2-201ENST00000604179 382 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms