Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CDX4O14627 RNU6-799P-201ENST00000363567 107 ntBASIC2.47□□□□□ -2.01
CDX4O14627 Y_RNA.238-201ENST00000364441 102 ntBASIC2.47□□□□□ -2.01
CDX4O14627 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.47□□□□□ -2.01
CDX4O14627 RNU1-39P-201ENST00000383897 165 ntBASIC2.47□□□□□ -2.01
CDX4O14627 RNU5A-6P-201ENST00000384136 116 ntBASIC2.47□□□□□ -2.01
CDX4O14627 MIR181A2-201ENST00000384863 110 ntBASIC2.47□□□□□ -2.01
CDX4O14627 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.47□□□□□ -2.01
CDX4O14627 AL451054.2-201ENST00000420896 202 ntBASIC2.47□□□□□ -2.01
CDX4O14627 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.47□□□□□ -2.01
CDX4O14627 AC137499.1-201ENST00000427602 88 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AC092573.2-201ENST00000434546 243 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AC009961.2-201ENST00000435771 251 ntBASIC2.47□□□□□ -2.01
CDX4O14627 DNAJC19P4-201ENST00000440115 345 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AC011816.1-201ENST00000441346 546 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.47□□□□□ -2.01
CDX4O14627 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.47□□□□□ -2.01
CDX4O14627 SNRPGP6-201ENST00000451124 220 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.47□□□□□ -2.01
CDX4O14627 AC092798.1-201ENST00000458542 409 ntBASIC2.47□□□□□ -2.01
CDX4O14627 RNU6-420P-201ENST00000458780 107 ntBASIC2.47□□□□□ -2.01
CDX4O14627 RPL37P6-201ENST00000460682 294 ntBASIC2.47□□□□□ -2.01
CDX4O14627 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.47□□□□□ -2.01
CDX4O14627 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.47□□□□□ -2.01
CDX4O14627 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
CDX4O14627 RNA5SP385-201ENST00000515947 110 ntBASIC2.47□□□□□ -2.01
CDX4O14627 Y_RNA.673-201ENST00000516306 88 ntBASIC2.47□□□□□ -2.01
CDX4O14627 RNU6-1282P-201ENST00000516735 96 ntBASIC2.47□□□□□ -2.01
CDX4O14627 RNU6-430P-201ENST00000517078 107 ntBASIC2.47□□□□□ -2.01
CDX4O14627 RNU6-64P-201ENST00000517119 105 ntBASIC2.47□□□□□ -2.01
CDX4O14627 NRON-201ENST00000517270 370 ntBASIC2.47□□□□□ -2.01
CDX4O14627 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
CDX4O14627 AP000867.2-201ENST00000532468 320 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.47□□□□□ -2.01
CDX4O14627 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.47□□□□□ -2.01
CDX4O14627 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.47□□□□□ -2.01
CDX4O14627 MIR1273D-201ENST00000577266 86 ntBASIC2.47□□□□□ -2.01
CDX4O14627 MTATP6P3-201ENST00000581686 676 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AF250324.2-201ENST00000608299 610 ntBASIC2.47□□□□□ -2.01
CDX4O14627 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.47□□□□□ -2.01
CDX4O14627 AC138649.3-201ENST00000622154 254 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AC068880.5-201ENST00000624331 290 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AL160394.1-201ENST00000624765 724 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.47□□□□□ -2.01
CDX4O14627 OR5H6-203ENST00000642105 978 ntBASIC2.47□□□□□ -2.01
CDX4O14627 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDX4O14627 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDX4O14627 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDX4O14627 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDX4O14627 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.46□□□□□ -2.01
CDX4O14627 AC004972.1-201ENST00000623934 2209 ntBASIC2.46□□□□□ -2.01
CDX4O14627 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CDX4O14627 SNORD114-1-201ENST00000362705 72 ntBASIC2.46□□□□□ -2.02
CDX4O14627 AL359511.1-201ENST00000402970 211 ntBASIC2.46□□□□□ -2.02
CDX4O14627 AL359634.1-202ENST00000404721 284 ntBASIC2.46□□□□□ -2.02
CDX4O14627 MIR548F1-201ENST00000408667 84 ntBASIC2.46□□□□□ -2.02
CDX4O14627 NDUFB4P5-201ENST00000415445 361 ntBASIC2.46□□□□□ -2.02
CDX4O14627 USP9YP20-201ENST00000419224 558 ntBASIC2.46□□□□□ -2.02
CDX4O14627 AL358934.1-201ENST00000432346 324 ntBASIC2.46□□□□□ -2.02
CDX4O14627 AL512844.2-201ENST00000433990 593 ntBASIC2.46□□□□□ -2.02
CDX4O14627 AC009969.1-201ENST00000438726 172 ntBASIC2.46□□□□□ -2.02
CDX4O14627 MTND1P1-201ENST00000445453 368 ntBASIC2.46□□□□□ -2.02
CDX4O14627 MTND1P12-201ENST00000455231 147 ntBASIC2.46□□□□□ -2.02
CDX4O14627 SNORD97-201ENST00000459187 142 ntBASIC2.46□□□□□ -2.02
CDX4O14627 RPS29P12-201ENST00000460178 152 ntBASIC2.46□□□□□ -2.02
CDX4O14627 RPS3AP17-201ENST00000472594 777 ntBASIC2.46□□□□□ -2.02
CDX4O14627 AC010631.1-201ENST00000474150 156 ntBASIC2.46□□□□□ -2.02
CDX4O14627 RPS26P21-201ENST00000475397 348 ntBASIC2.46□□□□□ -2.02
CDX4O14627 RPL9P6-201ENST00000492764 598 ntBASIC2.46□□□□□ -2.02
CDX4O14627 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.46□□□□□ -2.02
CDX4O14627 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.46□□□□□ -2.02
CDX4O14627 RNU6-506P-201ENST00000516553 94 ntBASIC2.46□□□□□ -2.02
CDX4O14627 RN7SKP282-201ENST00000516824 299 ntBASIC2.46□□□□□ -2.02
CDX4O14627 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.46□□□□□ -2.02
CDX4O14627 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.46□□□□□ -2.02
CDX4O14627 AC005951.2-201ENST00000576282 495 ntBASIC2.46□□□□□ -2.02
CDX4O14627 MIR3682-201ENST00000581338 84 ntBASIC2.46□□□□□ -2.02
CDX4O14627 GLUD1P4-201ENST00000590914 418 ntBASIC2.46□□□□□ -2.02
CDX4O14627 NUTF2P8-201ENST00000604593 363 ntBASIC2.46□□□□□ -2.02
CDX4O14627 AC126118.1-201ENST00000607744 628 ntBASIC2.46□□□□□ -2.02
CDX4O14627 AC007684.1-201ENST00000609671 477 ntBASIC2.46□□□□□ -2.02
CDX4O14627 AC109347.2-201ENST00000610220 349 ntBASIC2.46□□□□□ -2.02
CDX4O14627 ZNF72P-201ENST00000425869 1908 ntBASIC2.46□□□□□ -2.02
CDX4O14627 FARSBP1-201ENST00000435808 1778 ntBASIC2.46□□□□□ -2.02
CDX4O14627 API5P2-201ENST00000397055 1498 ntBASIC2.45□□□□□ -2.02
CDX4O14627 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDX4O14627 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AL049641.1-201ENST00000441055 1948 ntBASIC2.45□□□□□ -2.02
CDX4O14627 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
CDX4O14627 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDX4O14627 RNY3P13-201ENST00000365542 102 ntBASIC2.45□□□□□ -2.02
CDX4O14627 RNU1-73P-201ENST00000383971 164 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AL079342.1-201ENST00000401460 267 ntBASIC2.45□□□□□ -2.02
CDX4O14627 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDX4O14627 SDCBPP3-201ENST00000419629 891 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AC119618.1-201ENST00000434191 222 ntBASIC2.45□□□□□ -2.02
CDX4O14627 MTATP6P13-201ENST00000438531 667 ntBASIC2.45□□□□□ -2.02
CDX4O14627 Z82210.1-201ENST00000440037 231 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms