Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC026801.1-201ENST00000497178 464 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AC116562.3-201ENST00000506136 177 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 SCARNA17.1-201ENST00000516211 143 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 SCARNA17.2-201ENST00000516334 143 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC188H7C350 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC188H7C350 AC068587.5-201ENST00000528506 175 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AC021739.1-201ENST00000559631 174 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC188H7C350 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC188H7C350 OR1M4P-201ENST00000589199 287 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC188H7C350 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC188H7C350 DEFB131E-202ENST00000602581 683 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AC019159.1-201ENST00000605094 187 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 Z84480.1-201ENST00000605131 311 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AL121992.2-201ENST00000606262 256 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AC126118.1-201ENST00000607744 628 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AC006566.1-201ENST00000608943 513 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 SCARNA17.4-201ENST00000614296 143 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AC072046.2-201ENST00000618366 268 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AL157786.1-207ENST00000627771 695 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC188H7C350 RNU6-1280P-201ENST00000365211 107 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 RNU6-456P-201ENST00000384493 107 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 MIR627-201ENST00000384979 97 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC188H7C350 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC188H7C350 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.76□□□□□ -1.97
CCDC188H7C350 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.76□□□□□ -1.97
CCDC188H7C350 BRK1P2-201ENST00000442875 223 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 RPL23AP20-201ENST00000447965 421 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC188H7C350 KLF3P2-201ENST00000465138 268 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 RPS27P27-201ENST00000498779 255 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC188H7C350 AP001646.1-201ENST00000527936 915 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC188H7C350 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC188H7C350 MIR8057-201ENST00000620957 69 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
CCDC188H7C350 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC188H7C350 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC188H7C350 CKAP2P1-201ENST00000555477 2049 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 AL390237.1-201ENST00000404226 1415 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.76□□□□□ -1.97
CCDC188H7C350 RNU6-169P-201ENST00000365336 107 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 RNU6-898P-201ENST00000365627 104 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC188H7C350 RNU6-1083P-201ENST00000384022 107 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 RNU6-19P-201ENST00000384718 107 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC188H7C350 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC188H7C350 PTGES3P4-201ENST00000426243 356 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 TOMM20P4-201ENST00000427861 435 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC188H7C350 CACYBPP2-201ENST00000453625 678 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 AC107626.1-201ENST00000471084 183 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 AC087190.1-201ENST00000484462 480 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 AC117532.1-201ENST00000514638 323 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 RNU6-581P-201ENST00000516214 105 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 RNU6-703P-201ENST00000516946 107 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 AC009902.1-201ENST00000519351 183 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 OR5AL2P-201ENST00000532185 920 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 OR5BN1P-201ENST00000532955 829 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC188H7C350 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCDC188H7C350 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC188H7C350 AC012213.3-201ENST00000577199 777 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 MIR1273C-201ENST00000578669 77 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
CCDC188H7C350 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC188H7C350 AC068790.2-201ENST00000602601 557 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 NRBF2P5-201ENST00000603087 788 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 AC138649.3-201ENST00000622154 254 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.75□□□□□ -1.97
CCDC188H7C350 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CCDC188H7C350 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CCDC188H7C350 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC188H7C350 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CCDC188H7C350 OR5J1P-201ENST00000313544 939 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC188H7C350 MIR422A-201ENST00000362286 90 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 Y_RNA.22-201ENST00000362492 102 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 Y_RNA.77-201ENST00000362962 107 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 RN7SKP226-201ENST00000364912 300 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC188H7C350 SNORD116-2-201ENST00000384274 95 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 SNORD116-6-201ENST00000384711 96 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC188H7C350 RPL21P75-201ENST00000396599 483 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 RPL21P28-201ENST00000401418 483 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AL138827.1-201ENST00000402666 306 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AL592114.1-201ENST00000403842 483 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 RNA5SP21-201ENST00000410917 96 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 RNA5SP492-201ENST00000411330 114 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC188H7C350 AL160275.3-201ENST00000423876 471 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC133104.1-201ENST00000429100 218 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms