Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RPS29P29-201ENST00000456396 171 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 PRELID3BP1-201ENST00000457142 540 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 SETP6-201ENST00000479329 568 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 PSMC1P5-201ENST00000512850 177 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 EIF4BP1-201ENST00000554881 351 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR4648-201ENST00000580107 72 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AC011494.1-201ENST00000596454 237 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AP001429.1-201ENST00000602568 530 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AL020997.3-201ENST00000602843 359 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 WISP1-OT1-201ENST00000602893 642 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AL357094.1-201ENST00000603845 844 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AL021879.1-201ENST00000611756 288 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 SNORD33-201ENST00000362761 85 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 SNORD46.1-201ENST00000364139 104 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU4-38P-201ENST00000364472 129 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 SNORA67.5-201ENST00000391036 107 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR1302-8-201ENST00000408342 128 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 EIF1P1-201ENST00000421436 341 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 MTCO3P17-201ENST00000443775 513 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 AC108729.1-201ENST00000487812 947 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 AC008837.1-201ENST00000511513 412 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 PTP4A1P4-201ENST00000512479 322 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 AL121821.2-201ENST00000556081 394 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 AL391646.1-201ENST00000603860 190 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 AC123912.5-201ENST00000605470 343 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 BX323046.1-201ENST00000610145 535 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR8063-201ENST00000621930 81 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 AC099654.5-201ENST00000636479 350 ntBASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU6-414P-201ENST00000363705 104 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU4-51P-201ENST00000364206 140 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU6-77P-201ENST00000410554 91 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AC009518.2-201ENST00000418056 731 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 SNRPEP10-201ENST00000420249 274 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU6-295P-201ENST00000516901 104 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 SUB1P4-201ENST00000566062 339 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR4429-201ENST00000580105 73 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR3683-201ENST00000580847 82 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AC004805.2-201ENST00000605382 482 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AC084824.5-201ENST00000612009 413 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR6845-201ENST00000613182 61 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AL603758.1-201ENST00000618654 241 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 AP001002.2-201ENST00000625137 386 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR4275-201ENST00000636486 87 ntBASIC0.44□□□□□ -2.34
CHKB-CPT1BH3BT56 U8.2-201ENST00000363156 134 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU6-1032P-201ENST00000384100 107 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 SNORA25-201ENST00000384384 134 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 RPL22P22-201ENST00000395439 379 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 MTCYBP38-201ENST00000417160 1123 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AC005345.1-201ENST00000431868 217 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 MTCO3P5-201ENST00000433620 714 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 JTBP1-201ENST00000441314 247 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 RPL26P26-201ENST00000480251 434 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AC136628.3-201ENST00000521868 290 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 IGJP1-201ENST00000522682 475 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AP000763.2-201ENST00000540641 163 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AC004817.2-201ENST00000561794 651 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AC115989.2-201ENST00000578640 563 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AP005136.1-201ENST00000579765 429 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms