Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.14□□□□□ -2.39
LINC01549A6NIU2 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
LINC01549A6NIU2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.14□□□□□ -2.39
LINC01549A6NIU2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.14□□□□□ -2.39
LINC01549A6NIU2 SNORA77B-201ENST00000578179 125 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 AC080013.4-201ENST00000607624 649 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 AC013468.1-201ENST00000608680 598 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 AC243829.6-201ENST00000612652 106 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 U6.48-201ENST00000618523 106 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 MIR8065-201ENST00000620577 100 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 MIR6516-201ENST00000630554 81 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
LINC01549A6NIU2 SNORD33-201ENST00000362761 85 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 RNU6-1235P-201ENST00000384559 107 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 MIR29C-201ENST00000385231 88 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.13□□□□□ -2.39
LINC01549A6NIU2 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.13□□□□□ -2.39
LINC01549A6NIU2 CETN4P-201ENST00000432407 469 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.13□□□□□ -2.39
LINC01549A6NIU2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
LINC01549A6NIU2 RNU6-498P-201ENST00000459468 107 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 AC104164.3-201ENST00000467363 1258 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.13□□□□□ -2.39
LINC01549A6NIU2 AF131216.2-201ENST00000512316 564 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 SNORA48.9-201ENST00000516419 162 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.13□□□□□ -2.39
LINC01549A6NIU2 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.13□□□□□ -2.39
LINC01549A6NIU2 CYCSP23-201ENST00000519781 313 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 AC008562.1-201ENST00000521763 330 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.13□□□□□ -2.39
LINC01549A6NIU2 NDUFA5P6-201ENST00000542110 379 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 MIR3921-201ENST00000577308 85 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.13□□□□□ -2.39
LINC01549A6NIU2 AC105224.1-201ENST00000587055 421 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 ZNF92P3-201ENST00000596594 954 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 AP000403.1-201ENST00000603349 851 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 AL713866.2-201ENST00000603579 219 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 MIR6767-201ENST00000637302 66 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 MTND4P14-201ENST00000435799 1354 ntBASIC0.13□□□□□ -2.39
LINC01549A6NIU2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
LINC01549A6NIU2 RNU1-23P-201ENST00000363361 144 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 RNU6-1251P-201ENST00000364502 107 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 RNU6-110P-201ENST00000384508 104 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 MIR1290-201ENST00000408735 78 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 RNA5SP100-201ENST00000410903 110 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 RNA5SP59-201ENST00000410922 110 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC092634.6-201ENST00000418558 192 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 ARL5AP3-201ENST00000439327 386 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 RPL21P47-201ENST00000483696 477 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AL359273.1-201ENST00000510918 627 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC087854.1-201ENST00000519706 414 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC125611.1-201ENST00000549563 229 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC008015.1-201ENST00000555505 465 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AL512605.2-201ENST00000592972 256 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 SNRPGP17-201ENST00000603780 214 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AL589994.2-201ENST00000621124 579 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC095038.3-201ENST00000634439 195 ntBASIC0.12□□□□□ -2.39
LINC01549A6NIU2 AC010889.1-201ENST00000566193 2666 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.11□□□□□ -2.39
LINC01549A6NIU2 RNU6-486P-201ENST00000363116 107 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 RNU2-68P-201ENST00000410878 191 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 AL160275.3-201ENST00000423876 471 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.11□□□□□ -2.39
LINC01549A6NIU2 TAAR7P-201ENST00000436141 242 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 HMGN2P9-201ENST00000476875 229 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 AC034244.1-201ENST00000507687 207 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 AC008494.2-201ENST00000514544 370 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 AC018659.1-201ENST00000551083 169 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 AC136601.2-201ENST00000604356 474 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 AC018618.2-201ENST00000604770 446 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 MIR6134-201ENST00000617606 109 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 MIR5739-201ENST00000619803 80 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 MTCO1P9-201ENST00000505577 1534 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 AL049641.1-201ENST00000441055 1948 ntBASIC0.11□□□□□ -2.39
LINC01549A6NIU2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
LINC01549A6NIU2 FARSBP1-201ENST00000435808 1778 ntBASIC0.1□□□□□ -2.39
LINC01549A6NIU2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
LINC01549A6NIU2 OR4G2P-201ENST00000328113 903 ntBASIC0.1□□□□□ -2.39
LINC01549A6NIU2 AL161781.1-201ENST00000354277 403 ntBASIC0.1□□□□□ -2.39
LINC01549A6NIU2 MIR19B1-201ENST00000384829 87 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms