Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RPL7P42-201ENST00000481005 679 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 RPL30P14-201ENST00000482744 348 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 Y_RNA.708-201ENST00000516950 96 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AP000889.1-201ENST00000530968 660 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AC091516.1-201ENST00000549191 703 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AL355598.1-201ENST00000604169 202 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AL160281.1-201ENST00000605307 311 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AC124303.1-201ENST00000605703 360 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AC009229.3-201ENST00000608056 282 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AL157817.1-201ENST00000614264 790 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AL669831.3-213ENST00000636676 183 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 MTCO1P12-201ENST00000414273 1543 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.09□□□□□ -1.76
CCDC163A0A0D9SF12 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC163A0A0D9SF12 EOGT-210ENST00000615922 1931 ntBASIC4.09□□□□□ -1.76
CCDC163A0A0D9SF12 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.09□□□□□ -1.76
CCDC163A0A0D9SF12 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC163A0A0D9SF12 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-593P-201ENST00000364716 112 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-827P-201ENST00000365553 106 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-1035P-201ENST00000384477 107 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 SNORA1.3-201ENST00000384676 136 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 MIR34B-201ENST00000385076 84 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-954P-201ENST00000411355 107 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 USP9YP30-201ENST00000430729 455 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 AL645568.3-201ENST00000433683 316 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 KPNA2P1-201ENST00000458289 1591 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 snoU13.28-201ENST00000459235 104 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 AC010469.1-201ENST00000463864 576 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 RPS29P20-201ENST00000489592 171 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 RN7SKP46-201ENST00000515942 234 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 Y_RNA.670-201ENST00000516255 105 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 RNU1-95P-201ENST00000516357 160 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 Y_RNA.687-201ENST00000516558 91 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 RNU1-128P-201ENST00000516704 160 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-1183P-201ENST00000517054 60 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-711P-201ENST00000517255 106 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 LINC00933-203ENST00000559812 219 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 MIR5684-201ENST00000585074 65 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 AC133104.2-201ENST00000615272 193 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 AC068254.2-201ENST00000623938 3577 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 AC009093.8-201ENST00000641769 292 ntBASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC163A0A0D9SF12 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 Y_RNA.187-201ENST00000363918 113 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-898P-201ENST00000365627 104 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 RNU1-73P-201ENST00000383971 164 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-933P-201ENST00000384424 107 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-310P-201ENST00000384655 107 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 Y_RNA.594-201ENST00000410373 140 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 SNORD56-201ENST00000413522 71 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 Z99755.1-201ENST00000414048 380 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 AC099548.1-201ENST00000421443 426 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 RPL23AP50-201ENST00000434149 455 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 RPL37P4-201ENST00000448908 268 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 BTF3P15-201ENST00000455606 336 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 RPL23AP45-201ENST00000476406 468 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 AP003072.1-201ENST00000531740 145 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 AL442663.2-201ENST00000554385 511 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 SRGNP1-201ENST00000603392 451 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 AC018462.2-201ENST00000605375 395 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 MIR6868-201ENST00000611215 58 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 AC012314.7-201ENST00000619693 93 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 Z69720.2-201ENST00000624755 279 ntBASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC163A0A0D9SF12 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AL079305.1-201ENST00000623159 3008 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 MTND4P27-201ENST00000450813 1354 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-1059P-201ENST00000363752 98 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 SNORA3.3-201ENST00000408712 125 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 Y_RNA.646-201ENST00000410980 101 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms