Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC017099.1-201ENST00000448261 1028 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC132942.1-201ENST00000486753 483 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 CKS1BP2-201ENST00000497342 240 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 ARL2BPP4-201ENST00000506854 471 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 SNORA31.16-201ENST00000516773 139 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 COPS8P3-201ENST00000526024 482 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 CYB5AP5-201ENST00000549779 389 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC019288.1-201ENST00000557918 224 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 ROCK1P1-201ENST00000573767 549 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC009977.1-201ENST00000586015 570 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AF129408.1-201ENST00000608767 431 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC024257.5-201ENST00000612739 531 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC106800.4-201ENST00000614905 153 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 LINC00216-201ENST00000623548 1126 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU6-252P-201ENST00000363232 107 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU1-23P-201ENST00000363361 144 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU6-115P-201ENST00000364310 107 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 MIR29C-201ENST00000385231 88 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 RNA5SP100-201ENST00000410903 110 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 RNA5SP59-201ENST00000410922 110 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AL592310.1-201ENST00000414330 671 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 CYCSP33-201ENST00000414485 327 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 BTF3P4-201ENST00000418852 495 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 C1DP1-201ENST00000426049 402 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 SNORA59A-201ENST00000459326 152 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 RPS20P20-201ENST00000460498 340 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AC006512.1-201ENST00000468816 291 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 COX6CP14-201ENST00000469580 174 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 RPS23P4-201ENST00000487908 423 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 RPL22P13-201ENST00000493291 347 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 NRON-201ENST00000517270 370 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 CYCSP27-201ENST00000527643 293 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 RPL21P5-201ENST00000554662 472 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AC090079.2-201ENST00000575289 768 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 MIR4698-201ENST00000577795 80 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AP001429.1-201ENST00000602568 530 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AL713866.2-201ENST00000603579 219 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 DUXAP11-201ENST00000603858 526 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 ELOCP5-201ENST00000604924 333 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AC107075.1-201ENST00000613695 314 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AC013476.2-201ENST00000614456 459 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 MIR8074-201ENST00000615081 81 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 AC090517.3-201ENST00000625170 141 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 ZNF849P-201ENST00000594711 1566 ntBASIC0.62□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU6-271P-201ENST00000363858 105 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU6-619P-201ENST00000365146 108 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU6-439P-201ENST00000384188 106 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU1-57P-201ENST00000384491 166 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 CCDC58P2-201ENST00000417131 366 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 TOMM20P4-201ENST00000427861 435 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 MTCYBP32-201ENST00000427945 1084 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AL161651.1-201ENST00000440882 223 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 PRPS1P1-201ENST00000445305 876 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AC112492.4-201ENST00000456549 352 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU6-775P-201ENST00000459318 96 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 BOLA3P3-201ENST00000505182 232 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AC125611.1-201ENST00000549563 229 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AC005951.2-201ENST00000576282 495 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 BPTFP1-201ENST00000579209 492 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AL109620.1-201ENST00000618738 1197 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 AC091965.5-201ENST00000624785 342 ntBASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
TRAV1-2A0A0B4J238 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU11-3P-201ENST00000391111 133 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms