Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 LINC01006-201ENST00000333319 2292 ntBASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 KRT8P26-201ENST00000534154 1276 ntBASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 HOXB1-202ENST00000577092 1414 ntBASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN10AQ9Y5Y9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 MIR662-201ENST00000384847 95 ntBASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 RNF126P1-202ENST00000569893 925 ntBASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 DRAXINP1-201ENST00000437611 948 ntBASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 TSSC2-201ENST00000450217 709 ntBASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SCN10AQ9Y5Y9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 AL732292.2-201ENST00000609649 430 ntBASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 FDX1P1-201ENST00000449115 551 ntBASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 UNC93B7-201ENST00000509439 705 ntBASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 AP002414.4-201ENST00000589764 1148 ntBASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 AL157384.1-201ENST00000445995 2473 ntBASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCN10AQ9Y5Y9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 AC112907.3-201ENST00000577781 2400 ntBASIC20.84■□□□□ 0.93
SCN10AQ9Y5Y9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 AC011498.5-201ENST00000592027 486 ntBASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 AC112497.1-201ENST00000624824 639 ntBASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN10AQ9Y5Y9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms