Protein–RNA interactions for Protein: Q9ULH4

LRFN2, Leucine-rich repeat and fibronectin type-III domain-containing protein 2, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN2Q9ULH4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN2Q9ULH4 TCF3P1-201ENST00000423021 1937 ntBASIC20.53■□□□□ 0.88
LRFN2Q9ULH4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN2Q9ULH4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN2Q9ULH4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN2Q9ULH4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 HBZP1-201ENST00000354915 429 ntBASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 TPM4P1-201ENST00000436100 807 ntBASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 AC024243.1-201ENST00000609234 778 ntBASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRFN2Q9ULH4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.52■□□□□ 0.87
LRFN2Q9ULH4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.52■□□□□ 0.87
LRFN2Q9ULH4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 AC036111.1-201ENST00000533973 1582 ntBASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 AL645929.1-201ENST00000420084 975 ntBASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.51■□□□□ 0.87
LRFN2Q9ULH4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 AL023284.2-201ENST00000405850 579 ntBASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 MCCD1P1-208ENST00000445732 328 ntBASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN2Q9ULH4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 ATP5G2P1-201ENST00000433580 426 ntBASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 AC092597.1-201ENST00000487352 616 ntBASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 AL691432.3-201ENST00000621860 400 ntBASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRFN2Q9ULH4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms