Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
COL12A1Q99715 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.64■□□□□ 0.25
COL12A1Q99715 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.64■□□□□ 0.25
COL12A1Q99715 RPS8P6-201ENST00000426177 609 ntBASIC16.64■□□□□ 0.25
COL12A1Q99715 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.64■□□□□ 0.25
COL12A1Q99715 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.64■□□□□ 0.25
COL12A1Q99715 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.64■□□□□ 0.25
COL12A1Q99715 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL12A1Q99715 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.64■□□□□ 0.25
COL12A1Q99715 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.64■□□□□ 0.25
COL12A1Q99715 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.64■□□□□ 0.25
COL12A1Q99715 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
COL12A1Q99715 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL12A1Q99715 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL12A1Q99715 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL12A1Q99715 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL12A1Q99715 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
COL12A1Q99715 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL12A1Q99715 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL12A1Q99715 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COL12A1Q99715 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.63■□□□□ 0.25
COL12A1Q99715 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
COL12A1Q99715 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.63■□□□□ 0.25
COL12A1Q99715 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.63■□□□□ 0.25
COL12A1Q99715 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.63■□□□□ 0.25
COL12A1Q99715 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.63■□□□□ 0.25
COL12A1Q99715 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL12A1Q99715 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL12A1Q99715 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.63■□□□□ 0.25
COL12A1Q99715 AC244015.2-201ENST00000616358 1861 ntBASIC16.63■□□□□ 0.25
COL12A1Q99715 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
COL12A1Q99715 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
COL12A1Q99715 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.63■□□□□ 0.25
COL12A1Q99715 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.63■□□□□ 0.25
COL12A1Q99715 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.63■□□□□ 0.25
COL12A1Q99715 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL12A1Q99715 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.63■□□□□ 0.25
COL12A1Q99715 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL12A1Q99715 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL12A1Q99715 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.63■□□□□ 0.25
COL12A1Q99715 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 IGHV3-47-201ENST00000425060 335 ntBASIC16.62■□□□□ 0.25
COL12A1Q99715 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.62■□□□□ 0.25
COL12A1Q99715 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.62■□□□□ 0.25
COL12A1Q99715 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.62■□□□□ 0.25
COL12A1Q99715 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.62■□□□□ 0.25
COL12A1Q99715 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.62■□□□□ 0.25
COL12A1Q99715 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
COL12A1Q99715 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COL12A1Q99715 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COL12A1Q99715 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
COL12A1Q99715 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 GPAT2P1-201ENST00000444924 1672 ntBASIC16.62■□□□□ 0.25
COL12A1Q99715 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COL12A1Q99715 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.62■□□□□ 0.25
COL12A1Q99715 AC211486.1-202ENST00000416371 468 ntBASIC16.62■□□□□ 0.25
COL12A1Q99715 AC112482.1-201ENST00000492080 688 ntBASIC16.62■□□□□ 0.25
COL12A1Q99715 AC211476.1-201ENST00000503899 468 ntBASIC16.62■□□□□ 0.25
COL12A1Q99715 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.62■□□□□ 0.25
COL12A1Q99715 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.62■□□□□ 0.25
COL12A1Q99715 AL160286.2-201ENST00000567150 934 ntBASIC16.62■□□□□ 0.25
COL12A1Q99715 AL049840.3-201ENST00000602669 611 ntBASIC16.62■□□□□ 0.25
COL12A1Q99715 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
COL12A1Q99715 FEM1AP1-201ENST00000431297 1995 ntBASIC16.62■□□□□ 0.25
COL12A1Q99715 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 AL391807.1-203ENST00000604392 2365 ntBASIC16.62■□□□□ 0.25
COL12A1Q99715 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL12A1Q99715 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL12A1Q99715 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL12A1Q99715 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL12A1Q99715 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms