Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 VENTXP7-201ENST00000475503 772 ntBASIC31.59■■■□□ 2.65
IFT140Q96RY7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC31.59■■■□□ 2.65
IFT140Q96RY7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
IFT140Q96RY7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC31.59■■■□□ 2.65
IFT140Q96RY7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
IFT140Q96RY7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC31.59■■■□□ 2.65
IFT140Q96RY7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC31.59■■■□□ 2.65
IFT140Q96RY7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
IFT140Q96RY7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC31.59■■■□□ 2.65
IFT140Q96RY7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC31.59■■■□□ 2.65
IFT140Q96RY7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
IFT140Q96RY7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
IFT140Q96RY7 AC104390.1-201ENST00000555663 520 ntBASIC31.59■■■□□ 2.65
IFT140Q96RY7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC31.59■■■□□ 2.65
IFT140Q96RY7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
IFT140Q96RY7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC31.58■■■□□ 2.65
IFT140Q96RY7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
IFT140Q96RY7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
IFT140Q96RY7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC31.58■■■□□ 2.65
IFT140Q96RY7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
IFT140Q96RY7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
IFT140Q96RY7 HOXB1-202ENST00000577092 1414 ntBASIC31.58■■■□□ 2.65
IFT140Q96RY7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC31.58■■■□□ 2.65
IFT140Q96RY7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
IFT140Q96RY7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC31.58■■■□□ 2.65
IFT140Q96RY7 AC139887.3-201ENST00000568585 713 ntBASIC31.58■■■□□ 2.65
IFT140Q96RY7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
IFT140Q96RY7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC31.58■■■□□ 2.65
IFT140Q96RY7 AC140113.2-201ENST00000604370 208 ntBASIC31.58■■■□□ 2.65
IFT140Q96RY7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.65
IFT140Q96RY7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC31.57■■■□□ 2.65
IFT140Q96RY7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC31.57■■■□□ 2.64
IFT140Q96RY7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
IFT140Q96RY7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
IFT140Q96RY7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
IFT140Q96RY7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
IFT140Q96RY7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
IFT140Q96RY7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
IFT140Q96RY7 BNIP3P18-201ENST00000593976 575 ntBASIC31.57■■■□□ 2.64
IFT140Q96RY7 AC055717.3-201ENST00000622967 595 ntBASIC31.57■■■□□ 2.64
IFT140Q96RY7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC31.56■■■□□ 2.64
IFT140Q96RY7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
IFT140Q96RY7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC31.56■■■□□ 2.64
IFT140Q96RY7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
IFT140Q96RY7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
IFT140Q96RY7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
IFT140Q96RY7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
IFT140Q96RY7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC31.56■■■□□ 2.64
IFT140Q96RY7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
IFT140Q96RY7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC31.56■■■□□ 2.64
IFT140Q96RY7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
IFT140Q96RY7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC31.56■■■□□ 2.64
IFT140Q96RY7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
IFT140Q96RY7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
IFT140Q96RY7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
IFT140Q96RY7 KRT8P3-201ENST00000519669 1449 ntBASIC31.56■■■□□ 2.64
IFT140Q96RY7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
IFT140Q96RY7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
IFT140Q96RY7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC31.55■■■□□ 2.64
IFT140Q96RY7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
IFT140Q96RY7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
IFT140Q96RY7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
IFT140Q96RY7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC31.55■■■□□ 2.64
IFT140Q96RY7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
IFT140Q96RY7 AC093909.1-201ENST00000504731 1122 ntBASIC31.55■■■□□ 2.64
IFT140Q96RY7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC31.55■■■□□ 2.64
IFT140Q96RY7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
IFT140Q96RY7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
IFT140Q96RY7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
IFT140Q96RY7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
IFT140Q96RY7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC31.55■■■□□ 2.64
IFT140Q96RY7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC31.55■■■□□ 2.64
IFT140Q96RY7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
IFT140Q96RY7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC31.55■■■□□ 2.64
IFT140Q96RY7 AF106564.1-201ENST00000607058 2553 ntBASIC31.54■■■□□ 2.64
IFT140Q96RY7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
IFT140Q96RY7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC31.54■■■□□ 2.64
IFT140Q96RY7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
IFT140Q96RY7 AL139424.1-201ENST00000607572 797 ntBASIC31.54■■■□□ 2.64
IFT140Q96RY7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
IFT140Q96RY7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC31.54■■■□□ 2.64
IFT140Q96RY7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC31.54■■■□□ 2.64
IFT140Q96RY7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
IFT140Q96RY7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
IFT140Q96RY7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
IFT140Q96RY7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
IFT140Q96RY7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
IFT140Q96RY7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
IFT140Q96RY7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
IFT140Q96RY7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
IFT140Q96RY7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
IFT140Q96RY7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
IFT140Q96RY7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
IFT140Q96RY7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
IFT140Q96RY7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
IFT140Q96RY7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
IFT140Q96RY7 RPL13AP23-201ENST00000480739 586 ntBASIC31.53■■■□□ 2.64
IFT140Q96RY7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
IFT140Q96RY7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
IFT140Q96RY7 KRT8P7-201ENST00000533003 1432 ntBASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms