Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 AC093525.10-201ENST00000625130 1569 ntBASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 AC009065.1-201ENST00000564055 1225 ntBASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 AC074051.2-201ENST00000565115 352 ntBASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 REXO1L6P-202ENST00000619970 1078 ntBASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 AC134684.3-201ENST00000641758 218 ntBASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.18■□□□□ 0.5
CNTNAP3BQ96NU0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 AC034232.1-201ENST00000506026 1064 ntBASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 MIR3687-2-201ENST00000577708 61 ntBASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 MIR3687-1-201ENST00000614492 61 ntBASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.17■□□□□ 0.5
CNTNAP3BQ96NU0 KRT8P36-201ENST00000489121 1440 ntBASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 KRT18P67-201ENST00000432816 1264 ntBASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 AC112482.1-201ENST00000492080 688 ntBASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 AC099336.1-202ENST00000602961 463 ntBASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 AC148477.8-201ENST00000624298 468 ntBASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3BQ96NU0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms