Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 KRT8P3-201ENST00000519669 1449 ntBASIC20.22■□□□□ 0.83
ZNF558Q96NG5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 TSSC2-201ENST00000450217 709 ntBASIC20.22■□□□□ 0.83
ZNF558Q96NG5 BX276092.5-203ENST00000456199 560 ntBASIC20.22■□□□□ 0.83
ZNF558Q96NG5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 MIR3652-201ENST00000579335 131 ntBASIC20.22■□□□□ 0.83
ZNF558Q96NG5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 AC092329.2-201ENST00000598402 547 ntBASIC20.22■□□□□ 0.83
ZNF558Q96NG5 AL121672.3-201ENST00000608644 468 ntBASIC20.22■□□□□ 0.83
ZNF558Q96NG5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF558Q96NG5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.2■□□□□ 0.83
ZNF558Q96NG5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.2■□□□□ 0.82
ZNF558Q96NG5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 SEC1P-202ENST00000473944 940 ntBASIC20.2■□□□□ 0.82
ZNF558Q96NG5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF558Q96NG5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 PRELID1P1-202ENST00000567272 903 ntBASIC20.19■□□□□ 0.82
ZNF558Q96NG5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms