Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SMC5Q8IY18 RCC2P6-201ENST00000526625 1557 ntBASIC23.59■■□□□ 1.37
SMC5Q8IY18 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 AC005082.1-201ENST00000413042 2259 ntBASIC23.59■■□□□ 1.37
SMC5Q8IY18 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
SMC5Q8IY18 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
SMC5Q8IY18 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMC5Q8IY18 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SMC5Q8IY18 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMC5Q8IY18 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SMC5Q8IY18 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMC5Q8IY18 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMC5Q8IY18 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SMC5Q8IY18 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.58■■□□□ 1.37
SMC5Q8IY18 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
SMC5Q8IY18 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.58■■□□□ 1.37
SMC5Q8IY18 KSR1P1-201ENST00000446298 240 ntBASIC23.58■■□□□ 1.37
SMC5Q8IY18 AC091390.4-202ENST00000476426 537 ntBASIC23.58■■□□□ 1.37
SMC5Q8IY18 RPPH1-201ENST00000516869 333 ntBASIC23.58■■□□□ 1.37
SMC5Q8IY18 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.58■■□□□ 1.37
SMC5Q8IY18 AC090164.3-201ENST00000610780 2143 ntBASIC23.58■■□□□ 1.37
SMC5Q8IY18 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMC5Q8IY18 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.58■■□□□ 1.37
SMC5Q8IY18 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SMC5Q8IY18 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SMC5Q8IY18 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.58■■□□□ 1.36
SMC5Q8IY18 SNAI3-AS1-205ENST00000568633 2096 ntBASIC23.58■■□□□ 1.36
SMC5Q8IY18 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.58■■□□□ 1.36
SMC5Q8IY18 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SMC5Q8IY18 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.36
SMC5Q8IY18 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 C1QBPP2-201ENST00000528754 825 ntBASIC23.57■■□□□ 1.36
SMC5Q8IY18 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMC5Q8IY18 HEIH-201ENST00000623091 1652 ntBASIC23.57■■□□□ 1.36
SMC5Q8IY18 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.57■■□□□ 1.36
SMC5Q8IY18 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMC5Q8IY18 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMC5Q8IY18 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMC5Q8IY18 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.56■■□□□ 1.36
SMC5Q8IY18 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.56■■□□□ 1.36
SMC5Q8IY18 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SMC5Q8IY18 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.56■■□□□ 1.36
SMC5Q8IY18 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SMC5Q8IY18 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.56■■□□□ 1.36
SMC5Q8IY18 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMC5Q8IY18 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
SMC5Q8IY18 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMC5Q8IY18 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
SMC5Q8IY18 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMC5Q8IY18 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SMC5Q8IY18 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SMC5Q8IY18 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.55■■□□□ 1.36
SMC5Q8IY18 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
SMC5Q8IY18 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SMC5Q8IY18 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 AC008040.2-201ENST00000461049 708 ntBASIC23.55■■□□□ 1.36
SMC5Q8IY18 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
SMC5Q8IY18 AP002982.1-201ENST00000492365 877 ntBASIC23.55■■□□□ 1.36
SMC5Q8IY18 PRSS44-201ENST00000515154 1146 ntBASIC23.55■■□□□ 1.36
SMC5Q8IY18 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.55■■□□□ 1.36
SMC5Q8IY18 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.55■■□□□ 1.36
SMC5Q8IY18 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SMC5Q8IY18 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMC5Q8IY18 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms