Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RP1L1Q8IWN7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RP1L1Q8IWN7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
RP1L1Q8IWN7 ZNF444P1-201ENST00000559497 298 ntBASIC17.22■□□□□ 0.35
RP1L1Q8IWN7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.22■□□□□ 0.35
RP1L1Q8IWN7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.22■□□□□ 0.35
RP1L1Q8IWN7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
RP1L1Q8IWN7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.22■□□□□ 0.35
RP1L1Q8IWN7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.22■□□□□ 0.35
RP1L1Q8IWN7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RP1L1Q8IWN7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RP1L1Q8IWN7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 AC034232.1-201ENST00000506026 1064 ntBASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 AP003041.3-201ENST00000527151 707 ntBASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 AC012615.1-201ENST00000565797 1299 ntBASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 AC036111.1-201ENST00000533973 1582 ntBASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.21■□□□□ 0.35
RP1L1Q8IWN7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
RP1L1Q8IWN7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.21■□□□□ 0.34
RP1L1Q8IWN7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.21■□□□□ 0.34
RP1L1Q8IWN7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.21■□□□□ 0.34
RP1L1Q8IWN7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 AL022342.1-201ENST00000400363 863 ntBASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.2■□□□□ 0.34
RP1L1Q8IWN7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 AL645929.1-201ENST00000420084 975 ntBASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 BX119927.1-201ENST00000636596 1552 ntBASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 AC073314.1-201ENST00000568729 2216 ntBASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 AP002469.2-201ENST00000531724 424 ntBASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 AL160237.2-201ENST00000556165 472 ntBASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms