Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4Q8BQZ5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cpsf4Q8BQZ5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms