Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 AC018553.1-201ENST00000616682 1458 ntBASIC12.08□□□□□ -0.48
LINC00575Q6W349 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 AC083906.6-201ENST00000641366 219 ntBASIC12.07□□□□□ -0.48
LINC00575Q6W349 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 AC012313.1-201ENST00000593393 3059 ntBASIC12.07□□□□□ -0.48
LINC00575Q6W349 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00575Q6W349 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.07□□□□□ -0.48
LINC00575Q6W349 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC00575Q6W349 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 GNAS-203ENST00000306120 1878 ntBASIC12.06□□□□□ -0.48
LINC00575Q6W349 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 SIRPAP1-201ENST00000448467 1770 ntBASIC12.06□□□□□ -0.48
LINC00575Q6W349 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 MFSD11-216ENST00000590393 1141 ntBASIC12.06□□□□□ -0.48
LINC00575Q6W349 TRIR-205ENST00000592273 783 ntTSL 3 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 AL591742.1-201ENST00000604433 565 ntBASIC12.06□□□□□ -0.48
LINC00575Q6W349 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00575Q6W349 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LINC00575Q6W349 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms