Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 LINC00265-3P-201ENST00000447588 903 ntBASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 AP000867.3-201ENST00000524675 377 ntBASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 AC009078.2-202ENST00000463353 338 ntBASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 AC091304.2-201ENST00000564639 760 ntBASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 AL031008.1-201ENST00000619963 541 ntBASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
CNKSR3Q6P9H4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 AC012615.1-201ENST00000565797 1299 ntBASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 RNF126P1-202ENST00000569893 925 ntBASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CNKSR3Q6P9H4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 GABARAPL3-202ENST00000624044 1851 ntBASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 LINC01711-201ENST00000598340 967 ntBASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 AC104692.2-201ENST00000603054 253 ntBASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.46■□□□□ 0.87
CNKSR3Q6P9H4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CNKSR3Q6P9H4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 TOB2P1-201ENST00000469761 992 ntBASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 AL160237.2-201ENST00000556165 472 ntBASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.45■□□□□ 0.86
CNKSR3Q6P9H4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 FOSL1P1-201ENST00000511041 816 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms