Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.64■□□□□ 0.9
PRPF38BQ5VTL8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRPF38BQ5VTL8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRPF38BQ5VTL8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.64■□□□□ 0.9
PRPF38BQ5VTL8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.64■□□□□ 0.9
PRPF38BQ5VTL8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 AC023274.1-201ENST00000418278 595 ntBASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 FGFR3P6-201ENST00000457012 610 ntBASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 GUSBP12-201ENST00000513727 720 ntBASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 AC005829.1-201ENST00000570002 483 ntBASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 MIR3917-201ENST00000580971 93 ntBASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 AC124864.1-201ENST00000623408 392 ntBASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.64■□□□□ 0.89
PRPF38BQ5VTL8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 CNN2P11-201ENST00000429351 262 ntBASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 AL008721.1-201ENST00000609964 604 ntBASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 HLA-J-201ENST00000462773 1622 ntBASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.63■□□□□ 0.89
PRPF38BQ5VTL8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 AC127496.7-201ENST00000625110 1798 ntBASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 AC132008.2-207ENST00000454517 770 ntBASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 MIR4745-201ENST00000577608 62 ntBASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 AP001269.4-201ENST00000609611 512 ntBASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRPF38BQ5VTL8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 KRT8P11-201ENST00000409686 1436 ntBASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 AC015922.1-201ENST00000421102 1152 ntBASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 AC092910.1-201ENST00000482027 1129 ntBASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPF38BQ5VTL8 TMEM179-206ENST00000616017 1645 ntBASIC20.6■□□□□ 0.89
PRPF38BQ5VTL8 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.6■□□□□ 0.89
PRPF38BQ5VTL8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms