Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 AC091607.1-201ENST00000490318 1060 ntBASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 AC005332.3-201ENST00000589904 676 ntBASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SNAPC4Q5SXM2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC31.14■■■□□ 2.57
SNAPC4Q5SXM2 AL031284.1-201ENST00000419297 478 ntBASIC31.14■■■□□ 2.57
SNAPC4Q5SXM2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC31.14■■■□□ 2.57
SNAPC4Q5SXM2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC31.14■■■□□ 2.57
SNAPC4Q5SXM2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC31.14■■■□□ 2.57
SNAPC4Q5SXM2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.57
SNAPC4Q5SXM2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.57
SNAPC4Q5SXM2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 COX10-202ENST00000429152 875 ntTSL 2 BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 AC064862.7-201ENST00000604520 867 ntBASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
SNAPC4Q5SXM2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 AP005212.1-201ENST00000581547 1997 ntBASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC31.12■■■□□ 2.57
SNAPC4Q5SXM2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 RNPS1P1-201ENST00000507437 918 ntBASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 GPR32P1-201ENST00000601788 811 ntBASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
SNAPC4Q5SXM2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 AC018712.1-201ENST00000455767 687 ntBASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 LINC00565-201ENST00000562710 2331 ntBASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SNAPC4Q5SXM2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 EMD-201ENST00000369835 966 ntTSL 3 BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 MED22-202ENST00000371999 987 ntTSL 3 BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 AC009237.14-201ENST00000609975 1594 ntBASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
SNAPC4Q5SXM2 AP003733.1-201ENST00000491725 852 ntBASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms