Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 AFG3L1P-217ENST00000557444 2447 ntBASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 STARP1-201ENST00000397973 869 ntBASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 VENTXP5-201ENST00000523979 775 ntBASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 TEX21P-204ENST00000641479 1693 ntBASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM1Q2M3G4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 LINC01311-201ENST00000565162 1445 ntBASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHROOM1Q2M3G4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 ZNF444P1-201ENST00000559497 298 ntBASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 AC024243.1-201ENST00000609234 778 ntBASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM1Q2M3G4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 AL136038.3-201ENST00000561909 1096 ntBASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.22■■□□□ 1.15
SHROOM1Q2M3G4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 DUSP5P1-201ENST00000441325 1139 ntBASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.21■■□□□ 1.15
SHROOM1Q2M3G4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms