Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.05■□□□□ 0.8
ERVFC1P60507 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.04■□□□□ 0.8
ERVFC1P60507 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.04■□□□□ 0.8
ERVFC1P60507 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERVFC1P60507 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERVFC1P60507 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ERVFC1P60507 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERVFC1P60507 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ERVFC1P60507 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERVFC1P60507 NUS1P1-201ENST00000446295 882 ntBASIC20.04■□□□□ 0.8
ERVFC1P60507 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.04■□□□□ 0.8
ERVFC1P60507 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.04■□□□□ 0.8
ERVFC1P60507 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.04■□□□□ 0.8
ERVFC1P60507 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.04■□□□□ 0.8
ERVFC1P60507 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.04■□□□□ 0.8
ERVFC1P60507 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERVFC1P60507 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ERVFC1P60507 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.04■□□□□ 0.8
ERVFC1P60507 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERVFC1P60507 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ERVFC1P60507 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERVFC1P60507 AC093525.10-201ENST00000625130 1569 ntBASIC20.04■□□□□ 0.8
ERVFC1P60507 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ERVFC1P60507 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.03■□□□□ 0.8
ERVFC1P60507 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.03■□□□□ 0.8
ERVFC1P60507 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
ERVFC1P60507 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ERVFC1P60507 CHCHD2P8-201ENST00000429873 447 ntBASIC20.03■□□□□ 0.8
ERVFC1P60507 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.03■□□□□ 0.8
ERVFC1P60507 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ERVFC1P60507 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ERVFC1P60507 AL391807.1-203ENST00000604392 2365 ntBASIC20.03■□□□□ 0.8
ERVFC1P60507 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ERVFC1P60507 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.03■□□□□ 0.8
ERVFC1P60507 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
ERVFC1P60507 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERVFC1P60507 KRT18P1-202ENST00000452408 1331 ntBASIC20.02■□□□□ 0.8
ERVFC1P60507 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.02■□□□□ 0.8
ERVFC1P60507 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERVFC1P60507 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERVFC1P60507 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERVFC1P60507 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERVFC1P60507 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERVFC1P60507 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ERVFC1P60507 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERVFC1P60507 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERVFC1P60507 MIR662-201ENST00000384847 95 ntBASIC20.02■□□□□ 0.8
ERVFC1P60507 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ERVFC1P60507 TSPY22P-201ENST00000427496 604 ntBASIC20.02■□□□□ 0.8
ERVFC1P60507 FAAHP1-202ENST00000446499 1238 ntBASIC20.02■□□□□ 0.8
ERVFC1P60507 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.02■□□□□ 0.8
ERVFC1P60507 EMBP1-201ENST00000458200 901 ntBASIC20.02■□□□□ 0.8
ERVFC1P60507 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.02■□□□□ 0.8
ERVFC1P60507 AL136038.4-201ENST00000603606 1261 ntBASIC20.02■□□□□ 0.8
ERVFC1P60507 IFNL4P1-201ENST00000607083 540 ntBASIC20.02■□□□□ 0.8
ERVFC1P60507 AC112497.1-201ENST00000624824 639 ntBASIC20.02■□□□□ 0.8
ERVFC1P60507 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.02■□□□□ 0.8
ERVFC1P60507 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.02■□□□□ 0.8
ERVFC1P60507 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERVFC1P60507 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.02■□□□□ 0.8
ERVFC1P60507 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERVFC1P60507 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
ERVFC1P60507 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERVFC1P60507 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERVFC1P60507 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERVFC1P60507 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ERVFC1P60507 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ERVFC1P60507 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERVFC1P60507 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERVFC1P60507 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERVFC1P60507 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ERVFC1P60507 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERVFC1P60507 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERVFC1P60507 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERVFC1P60507 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERVFC1P60507 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.01■□□□□ 0.79
ERVFC1P60507 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.01■□□□□ 0.79
ERVFC1P60507 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.01■□□□□ 0.79
ERVFC1P60507 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.01■□□□□ 0.79
ERVFC1P60507 RNF126P1-202ENST00000569893 925 ntBASIC20.01■□□□□ 0.79
ERVFC1P60507 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ERVFC1P60507 MIR3917-201ENST00000580971 93 ntBASIC20.01■□□□□ 0.79
ERVFC1P60507 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERVFC1P60507 AL732292.2-201ENST00000609649 430 ntBASIC20.01■□□□□ 0.79
ERVFC1P60507 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ERVFC1P60507 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms