Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH8P55286 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH8P55286 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.33■□□□□ 0.84
CDH8P55286 FP475955.4-201ENST00000623131 1990 ntBASIC20.33■□□□□ 0.84
CDH8P55286 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH8P55286 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH8P55286 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH8P55286 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.33■□□□□ 0.84
CDH8P55286 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.33■□□□□ 0.84
CDH8P55286 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.33■□□□□ 0.84
CDH8P55286 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH8P55286 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH8P55286 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH8P55286 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH8P55286 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH8P55286 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH8P55286 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.32■□□□□ 0.84
CDH8P55286 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.32■□□□□ 0.84
CDH8P55286 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH8P55286 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDH8P55286 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH8P55286 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
CDH8P55286 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CDH8P55286 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH8P55286 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDH8P55286 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDH8P55286 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH8P55286 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDH8P55286 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH8P55286 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CDH8P55286 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH8P55286 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH8P55286 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH8P55286 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH8P55286 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CDH8P55286 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH8P55286 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH8P55286 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH8P55286 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDH8P55286 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH8P55286 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH8P55286 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDH8P55286 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CDH8P55286 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH8P55286 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CDH8P55286 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH8P55286 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH8P55286 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH8P55286 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDH8P55286 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH8P55286 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
CDH8P55286 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH8P55286 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH8P55286 ECEL1P3-201ENST00000427961 737 ntBASIC20.3■□□□□ 0.84
CDH8P55286 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH8P55286 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH8P55286 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH8P55286 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH8P55286 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.3■□□□□ 0.84
CDH8P55286 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH8P55286 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CDH8P55286 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDH8P55286 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
CDH8P55286 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH8P55286 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH8P55286 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.3■□□□□ 0.84
CDH8P55286 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH8P55286 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH8P55286 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDH8P55286 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CDH8P55286 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH8P55286 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH8P55286 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH8P55286 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH8P55286 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH8P55286 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH8P55286 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
CDH8P55286 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH8P55286 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH8P55286 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH8P55286 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH8P55286 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH8P55286 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH8P55286 C2orf69P3-201ENST00000565542 1120 ntBASIC20.29■□□□□ 0.84
CDH8P55286 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH8P55286 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms