Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 KRT18P67-201ENST00000432816 1264 ntBASIC21.76■■□□□ 1.07
TM4SF4P48230 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.76■■□□□ 1.07
TM4SF4P48230 AC009065.1-201ENST00000564055 1225 ntBASIC21.76■■□□□ 1.07
TM4SF4P48230 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.76■■□□□ 1.07
TM4SF4P48230 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
TM4SF4P48230 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF4P48230 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF4P48230 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF4P48230 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF4P48230 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF4P48230 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF4P48230 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF4P48230 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TM4SF4P48230 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
TM4SF4P48230 AC005104.2-201ENST00000427818 678 ntBASIC21.75■■□□□ 1.07
TM4SF4P48230 AC104390.1-201ENST00000555663 520 ntBASIC21.75■■□□□ 1.07
TM4SF4P48230 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.75■■□□□ 1.07
TM4SF4P48230 GPR32P1-201ENST00000601788 811 ntBASIC21.75■■□□□ 1.07
TM4SF4P48230 TERC-201ENST00000602385 541 ntBASIC21.75■■□□□ 1.07
TM4SF4P48230 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.75■■□□□ 1.07
TM4SF4P48230 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.75■■□□□ 1.07
TM4SF4P48230 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.75■■□□□ 1.07
TM4SF4P48230 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.75■■□□□ 1.07
TM4SF4P48230 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF4P48230 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF4P48230 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF4P48230 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF4P48230 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TM4SF4P48230 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.74■■□□□ 1.07
TM4SF4P48230 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF4P48230 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF4P48230 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.74■■□□□ 1.07
TM4SF4P48230 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TM4SF4P48230 KRT8P7-201ENST00000533003 1432 ntBASIC21.74■■□□□ 1.07
TM4SF4P48230 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF4P48230 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF4P48230 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.74■■□□□ 1.07
TM4SF4P48230 HMGN1P19-201ENST00000436976 333 ntBASIC21.74■■□□□ 1.07
TM4SF4P48230 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.74■■□□□ 1.07
TM4SF4P48230 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.74■■□□□ 1.07
TM4SF4P48230 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.74■■□□□ 1.07
TM4SF4P48230 AC124864.1-201ENST00000623408 392 ntBASIC21.74■■□□□ 1.07
TM4SF4P48230 AC148477.8-201ENST00000624298 468 ntBASIC21.74■■□□□ 1.07
TM4SF4P48230 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TM4SF4P48230 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF4P48230 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF4P48230 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.74■■□□□ 1.07
TM4SF4P48230 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
TM4SF4P48230 KRT8P3-201ENST00000519669 1449 ntBASIC21.73■■□□□ 1.07
TM4SF4P48230 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF4P48230 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF4P48230 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF4P48230 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.73■■□□□ 1.07
TM4SF4P48230 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TM4SF4P48230 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.73■■□□□ 1.07
TM4SF4P48230 AF186996.4-201ENST00000467186 377 ntBASIC21.73■■□□□ 1.07
TM4SF4P48230 AC093909.1-201ENST00000504731 1122 ntBASIC21.73■■□□□ 1.07
TM4SF4P48230 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.73■■□□□ 1.07
TM4SF4P48230 GUSBP12-201ENST00000513727 720 ntBASIC21.73■■□□□ 1.07
TM4SF4P48230 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.73■■□□□ 1.07
TM4SF4P48230 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.73■■□□□ 1.07
TM4SF4P48230 AC010240.3-201ENST00000607688 395 ntBASIC21.73■■□□□ 1.07
TM4SF4P48230 AL592071.1-201ENST00000611956 408 ntBASIC21.73■■□□□ 1.07
TM4SF4P48230 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.73■■□□□ 1.07
TM4SF4P48230 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.73■■□□□ 1.07
TM4SF4P48230 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF4P48230 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF4P48230 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
TM4SF4P48230 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF4P48230 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF4P48230 AC243591.1-201ENST00000452967 1364 ntBASIC21.73■■□□□ 1.07
TM4SF4P48230 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF4P48230 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TM4SF4P48230 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.72■■□□□ 1.07
TM4SF4P48230 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.72■■□□□ 1.07
TM4SF4P48230 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.72■■□□□ 1.07
TM4SF4P48230 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 NUS1P2-201ENST00000417358 873 ntBASIC21.72■■□□□ 1.07
TM4SF4P48230 KRT18P23-201ENST00000435622 1283 ntBASIC21.72■■□□□ 1.07
TM4SF4P48230 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.72■■□□□ 1.07
TM4SF4P48230 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.72■■□□□ 1.07
TM4SF4P48230 AP005901.3-202ENST00000581653 237 ntBASIC21.72■■□□□ 1.07
TM4SF4P48230 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TM4SF4P48230 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF4P48230 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.71■■□□□ 1.07
TM4SF4P48230 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
TM4SF4P48230 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF4P48230 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF4P48230 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.71■■□□□ 1.07
TM4SF4P48230 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms