Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 SLC7A5P1-201ENST00000568957 537 ntBASIC17.94■□□□□ 0.46
CLPTM1O96005 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLPTM1O96005 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.94■□□□□ 0.46
CLPTM1O96005 AC010536.3-201ENST00000620306 533 ntBASIC17.94■□□□□ 0.46
CLPTM1O96005 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLPTM1O96005 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLPTM1O96005 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 AC141586.5-201ENST00000624546 2050 ntBASIC17.94■□□□□ 0.46
CLPTM1O96005 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPTM1O96005 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLPTM1O96005 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLPTM1O96005 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLPTM1O96005 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CLPTM1O96005 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.93■□□□□ 0.46
CLPTM1O96005 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.93■□□□□ 0.46
CLPTM1O96005 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.93■□□□□ 0.46
CLPTM1O96005 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.93■□□□□ 0.46
CLPTM1O96005 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.93■□□□□ 0.46
CLPTM1O96005 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLPTM1O96005 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 AC116050.2-201ENST00000612102 1779 ntBASIC17.93■□□□□ 0.46
CLPTM1O96005 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.93■□□□□ 0.46
CLPTM1O96005 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.93■□□□□ 0.46
CLPTM1O96005 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.93■□□□□ 0.46
CLPTM1O96005 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLPTM1O96005 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.92■□□□□ 0.46
CLPTM1O96005 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
CLPTM1O96005 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 PCDHA12-202ENST00000613593 2588 ntBASIC17.92■□□□□ 0.46
CLPTM1O96005 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.92■□□□□ 0.46
CLPTM1O96005 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
CLPTM1O96005 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLPTM1O96005 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLPTM1O96005 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.92■□□□□ 0.46
CLPTM1O96005 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLPTM1O96005 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLPTM1O96005 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.92■□□□□ 0.46
CLPTM1O96005 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.92■□□□□ 0.46
CLPTM1O96005 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.92■□□□□ 0.46
CLPTM1O96005 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.92■□□□□ 0.46
CLPTM1O96005 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
CLPTM1O96005 AC141586.3-201ENST00000562166 1838 ntBASIC17.92■□□□□ 0.46
CLPTM1O96005 ESPNP-201ENST00000270691 2015 ntBASIC17.92■□□□□ 0.46
CLPTM1O96005 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.92■□□□□ 0.46
CLPTM1O96005 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLPTM1O96005 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.92■□□□□ 0.46
CLPTM1O96005 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLPTM1O96005 AL512353.2-201ENST00000448759 1962 ntBASIC17.91■□□□□ 0.46
CLPTM1O96005 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.91■□□□□ 0.46
CLPTM1O96005 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.91■□□□□ 0.46
CLPTM1O96005 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLPTM1O96005 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 AC008764.6-201ENST00000595909 2069 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms