Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.67■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 Z92544.1-202ENST00000571933 1220 ntBASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 AC023824.1-201ENST00000562945 2975 ntBASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 AL662844.4-201ENST00000606367 2838 ntBASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 PP12613-201ENST00000424958 2230 ntBASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.64■□□□□ 0.26
BOLA2-SMG1P6H3BVE0 OR6D1P-202ENST00000641007 5290 ntBASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 MIR6722-201ENST00000617286 78 ntBASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.63■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.63■□□□□ 0.25
BOLA2-SMG1P6H3BVE0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms