Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 Y_RNA.2-201ENST00000362330 96 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 RNU6-843P-201ENST00000384454 104 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 RNU6-748P-201ENST00000384648 107 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 MIR521-1-201ENST00000384902 87 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 RNU2-49P-201ENST00000410666 184 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 AL133396.1-201ENST00000432048 687 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 RNU7-152P-201ENST00000458982 64 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 RN7SL738P-201ENST00000470264 297 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 AC244505.7-201ENST00000599675 272 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 AC019159.1-201ENST00000605094 187 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 AL356157.2-201ENST00000605122 111 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 RNU6-227P-201ENST00000362865 103 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 Y_RNA.419-201ENST00000384041 102 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 BTF3L4P2-201ENST00000392798 346 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 USMG5P1-201ENST00000425964 177 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 ELOCP24-201ENST00000456370 334 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 Y_RNA.670-201ENST00000516255 105 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 AC011447.4-201ENST00000587562 111 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 AC011494.1-201ENST00000596454 237 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 AC091152.3-201ENST00000604227 325 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 AC093799.2-201ENST00000610062 578 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 MIR1910-201ENST00000636955 80 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 AC032011.1-201ENST00000611703 1549 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 RAD17P1-201ENST00000418130 2042 ntBASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GTF3C3Q9Y5Q9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 SNORD56.1-201ENST00000362913 68 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 RNA5SP510-201ENST00000364697 99 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 U8.8-201ENST00000365399 135 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 RNU6-487P-201ENST00000365430 104 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 RNA5SP390-201ENST00000410191 113 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 BX510359.2-201ENST00000417920 305 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 YWHAEP1-201ENST00000453697 763 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 SNORD46.2-201ENST00000516021 102 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 RNU5B-3P-201ENST00000516601 115 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 AC010653.1-201ENST00000571108 881 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 AL355877.2-201ENST00000603670 358 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 AL354984.3-201ENST00000604803 325 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 AC080078.3-201ENST00000605407 463 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 RNU6-91P-201ENST00000607774 107 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 AC090971.5-201ENST00000621102 293 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 AC090617.7-201ENST00000623952 126 ntBASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GTF3C3Q9Y5Q9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 FTH1P25-201ENST00000447665 469 ntBASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 AC097462.2-201ENST00000504623 481 ntBASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 PTP4A1P4-201ENST00000512479 322 ntBASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 AC004980.4-201ENST00000513375 203 ntBASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 AL442663.2-201ENST00000554385 511 ntBASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 AC078795.3-201ENST00000602913 472 ntBASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 BRDTP1-201ENST00000605735 677 ntBASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 MIR6778-201ENST00000617912 73 ntBASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
GTF3C3Q9Y5Q9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
GTF3C3Q9Y5Q9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.49□□□□□ -1.53
GTF3C3Q9Y5Q9 U1.1-201ENST00000384101 164 ntBASIC5.49□□□□□ -1.53
GTF3C3Q9Y5Q9 RNU6-43P-201ENST00000384302 107 ntBASIC5.49□□□□□ -1.53
GTF3C3Q9Y5Q9 MIR184-201ENST00000384962 84 ntBASIC5.49□□□□□ -1.53
GTF3C3Q9Y5Q9 MIR323B-201ENST00000385269 82 ntBASIC5.49□□□□□ -1.53
GTF3C3Q9Y5Q9 MIR147B-201ENST00000390185 80 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms