Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 MIR148B-201ENST00000362252 99 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-600P-201ENST00000362524 99 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-223P-201ENST00000362830 107 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-451P-201ENST00000362921 107 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-108P-201ENST00000365558 107 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 MIR9-1-201ENST00000385198 89 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 MIR887-201ENST00000401258 79 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 RPL21P66-201ENST00000426566 466 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 GTF2IP20-201ENST00000431663 360 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC112220.1-201ENST00000434628 355 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 RPL7P54-201ENST00000438336 674 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC098614.3-201ENST00000438957 440 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 snoU13.4-201ENST00000458916 104 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC128713.1-201ENST00000471495 306 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC023194.1-201ENST00000493084 308 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 MTCYBP18-201ENST00000501056 747 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 HMGB3P15-201ENST00000507326 574 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC117522.1-201ENST00000509821 380 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 MIR4293-201ENST00000584305 78 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC104984.5-201ENST00000586878 94 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AP001330.4-201ENST00000604350 154 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC136601.2-201ENST00000604356 474 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC007621.1-201ENST00000604544 437 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC006111.3-201ENST00000622137 383 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 AC002546.1-201ENST00000588041 2504 ntBASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHAC2Q9Y5I4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 CASC19-280ENST00000642102 1351 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC009487.2-201ENST00000420969 6821 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 SNORA72.1-201ENST00000363485 129 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 RNU6-456P-201ENST00000384493 107 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 MT-TL1-201ENST00000386347 75 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AL109755.1-201ENST00000401791 649 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 RPL21P24-201ENST00000413752 448 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 MTCO1P39-201ENST00000426148 480 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AL606489.2-201ENST00000433886 234 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC024082.2-201ENST00000434771 238 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 HMGN2P20-201ENST00000437531 273 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 CACYBPP2-201ENST00000453625 678 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 HMGN2P16-201ENST00000456802 261 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC003982.1-202ENST00000469928 248 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC083798.1-201ENST00000472671 131 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 RPL23AP55-201ENST00000498163 452 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC006445.2-201ENST00000510061 472 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 RNU6-1281P-201ENST00000516223 105 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 RNU6-64P-201ENST00000517119 105 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 RNU6-840P-201ENST00000517275 65 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC011979.2-201ENST00000527568 352 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 SNRPGP16-201ENST00000533275 226 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC123904.3-201ENST00000547218 814 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC008752.3-201ENST00000588113 712 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC060780.3-201ENST00000589464 80 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 GLUD1P4-201ENST00000590914 418 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC012507.3-201ENST00000603556 477 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 TUG1_2.1-201ENST00000614234 87 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AL603758.1-201ENST00000618654 241 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 AL353748.2-201ENST00000622148 471 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 ZNF680P1-201ENST00000436625 1469 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 MTND5P27-201ENST00000428871 1720 ntBASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHAC2Q9Y5I4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHAC2Q9Y5I4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHAC2Q9Y5I4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms