Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RN7SL271P-201ENST00000487601 295 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 RN7SL323P-201ENST00000494712 295 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 BTF3L4P4-201ENST00000506381 449 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 IGKV2-38-201ENST00000517443 247 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC105029.1-201ENST00000520250 669 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC100830.2-201ENST00000581636 240 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC023043.2-201ENST00000589678 1026 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC002044.1-201ENST00000606707 158 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC128687.2-201ENST00000609657 566 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC068831.7-201ENST00000616954 363 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 RMST_7.1-201ENST00000621935 268 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC006111.3-201ENST00000622137 383 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC073308.1-201ENST00000623696 305 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC244205.2-202ENST00000635781 342 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 SNORD46.1-201ENST00000364139 104 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 SNORA73.2-201ENST00000364946 201 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 MIR30B-201ENST00000384850 88 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 MIR7-3-201ENST00000384898 110 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 SNORA3.3-201ENST00000408712 125 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 CYCSP33-201ENST00000414485 327 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 RPL23AP82-202ENST00000427528 469 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 AL359672.1-201ENST00000442302 409 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 MRPL50P4-201ENST00000446432 475 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 AC139453.3-201ENST00000493276 369 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 YPEL5P3-201ENST00000547227 352 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 AC007151.1-201ENST00000572774 483 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 RPS3AP23-202ENST00000574601 686 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 FP236240.3-201ENST00000623061 327 ntBASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA3Q9Y5H0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 MTND4P29-201ENST00000503122 1372 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 AC073544.1-201ENST00000600110 1595 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 MIR208A-201ENST00000362287 71 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 SNORA63.1-201ENST00000362493 131 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU1-73P-201ENST00000383971 164 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU6-166P-201ENST00000384371 107 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU6-1106P-201ENST00000390845 107 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 AL360182.1-201ENST00000397433 468 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 AC074085.1-201ENST00000413598 418 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 MTND4P28-201ENST00000426217 387 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 AC087650.1-201ENST00000431445 468 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 SSXP4-201ENST00000451349 245 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 AL583843.1-201ENST00000456070 346 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 AC006026.2-201ENST00000457376 180 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU1-103P-201ENST00000516502 125 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU6-566P-201ENST00000516790 107 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 AC026403.1-201ENST00000518938 295 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 SCOCP1-201ENST00000554676 349 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 MIR3672-201ENST00000584290 82 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 AC005858.4-201ENST00000623191 700 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 AL359697.1-201ENST00000624879 587 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 U2.21-201ENST00000637295 81 ntBASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA3Q9Y5H0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 NCAPGP1-201ENST00000505112 1814 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms