Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 RPL26P9-201ENST00000457466 433 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 RPL7P47-201ENST00000497299 556 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 AC008526.1-201ENST00000509149 338 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 Y_RNA.682-201ENST00000516457 100 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 AC109479.2-201ENST00000517842 174 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 IGKV2-23-201ENST00000518729 323 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 APOOP1-201ENST00000604695 592 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-85P-201ENST00000605989 107 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 AC069234.5-201ENST00000611056 416 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 SCARNA4-202ENST00000625402 129 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 Y_RNA.135-201ENST00000363439 95 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-384P-201ENST00000364900 104 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-658P-201ENST00000384606 106 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-293P-201ENST00000411259 106 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 RAB9AP3-201ENST00000412737 573 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AL645568.3-201ENST00000433683 316 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 RPL23AP83-201ENST00000434984 473 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AC005019.1-201ENST00000436455 431 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 RAB9AP1-201ENST00000449393 573 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 MRPS31P2-201ENST00000451581 518 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AC087884.1-201ENST00000469738 328 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 RPL7P43-201ENST00000478876 753 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 RPL29P14-201ENST00000495837 428 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 Y_RNA.675-201ENST00000516389 149 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-1332P-201ENST00000516666 104 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AC091516.1-201ENST00000549191 703 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 MIR4790-201ENST00000577799 79 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 MIR4474-201ENST00000579189 78 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AC138761.3-201ENST00000579993 334 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AC113139.1-201ENST00000605049 239 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AL121772.2-201ENST00000614331 297 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 FAM157A-202ENST00000615155 405 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 AL359314.1-201ENST00000616913 261 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA9Q9Y5G4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 Y_RNA.184-201ENST00000363884 108 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 RNA5SP387-201ENST00000364226 106 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 Y_RNA.387-201ENST00000383918 102 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU1-89P-201ENST00000384592 164 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 PTMAP5-201ENST00000393073 333 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 MIR548K-201ENST00000408406 116 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 SNORA3C-201ENST00000408792 125 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 PRSS3P4-201ENST00000453323 162 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 Y_RNA.635-201ENST00000459041 101 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 HMGN1P11-201ENST00000508668 303 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 SNORA31.1-201ENST00000515993 133 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 SNORA31.5-201ENST00000516190 133 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-1088P-201ENST00000516850 104 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 AC069200.1-201ENST00000609511 323 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 MIR6868-201ENST00000611215 58 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 AC004852.3-201ENST00000614131 326 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 Z69720.2-201ENST00000624755 279 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 MIR1302-1-201ENST00000637932 143 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 AC112487.2-201ENST00000637950 304 ntBASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms