Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 MIR95-201ENST00000385072 81 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 RPS20P15-201ENST00000412792 311 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC244035.1-201ENST00000430042 390 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 IFNA20P-201ENST00000436840 528 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC017099.1-201ENST00000448261 1028 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 snoU109.1-201ENST00000459339 135 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 BZW1P2-201ENST00000473537 826 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC107953.1-201ENST00000522216 297 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 DEFB131D-201ENST00000526803 184 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC023825.1-201ENST00000566704 1030 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 DEFB122-202ENST00000569013 197 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC090079.2-201ENST00000575289 768 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 BNIP3P23-201ENST00000599655 511 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC021171.1-201ENST00000603137 706 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC104763.2-201ENST00000604179 382 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AL355297.2-201ENST00000604792 129 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC022202.1-201ENST00000613515 211 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 AC116618.1-201ENST00000634617 774 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 Z75746.1-201ENST00000440243 2080 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 NACAP2-201ENST00000318548 624 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 RNA5SP276-201ENST00000362580 94 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 RNA5SP240-201ENST00000365355 128 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 RNU6-658P-201ENST00000384606 106 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 RNA5SP450-201ENST00000411206 102 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 AC097463.2-201ENST00000421074 142 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 AC010631.1-201ENST00000474150 156 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 MTCO3P27-201ENST00000514397 196 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 RNY4P37-201ENST00000516225 96 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 RNU6-390P-201ENST00000516259 103 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 SNORA25.15-201ENST00000516487 89 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 AC073544.2-201ENST00000601155 540 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 AC007038.2-201ENST00000608095 740 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.51□□□□□ -2.17
HDGFL3Q9Y3E1 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 RNU6-744P-201ENST00000365557 107 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 RNU6-1316P-201ENST00000384242 108 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 MIR504-201ENST00000385065 83 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 USP9YP6-201ENST00000413550 854 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 USP9YP21-201ENST00000420603 432 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 PGBD4P6-201ENST00000421501 610 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 GPM6BP2-201ENST00000432046 144 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 RPL7P34-201ENST00000433316 712 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 GTF2IP3-201ENST00000433887 494 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 GPM6BP1-201ENST00000446387 144 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 RPL7P12-201ENST00000446719 750 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 CYP2C59P-201ENST00000457790 269 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 RN7SKP258-201ENST00000517151 304 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 UBE2L4-201ENST00000587688 464 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 AC025811.1-201ENST00000604312 472 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 AP003485.1-201ENST00000625093 753 ntBASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.5□□□□□ -2.17
HDGFL3Q9Y3E1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 U3.13-201ENST00000364804 214 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AL021407.1-201ENST00000404531 386 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AL356432.1-201ENST00000405809 419 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 SNORD56-201ENST00000413522 71 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms