Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RNU6-701P-201ENST00000384059 107 ntBASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 RNU6-387P-201ENST00000411331 105 ntBASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 SNRPEP10-201ENST00000420249 274 ntBASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 DPPA3P1-201ENST00000448050 469 ntBASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 RPS20P20-201ENST00000460498 340 ntBASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 MRPS17P3-201ENST00000465453 385 ntBASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 AC174048.1-201ENST00000603389 144 ntBASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 ZNF826P-207ENST00000622273 1910 ntBASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 SNORA62.1-201ENST00000364287 154 ntBASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 Y_RNA.381-201ENST00000365666 102 ntBASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 AL591416.1-201ENST00000404015 867 ntBASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 USP9YP6-201ENST00000413550 854 ntBASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 AL139281.1-201ENST00000422120 335 ntBASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 RPL31P12-201ENST00000422587 358 ntBASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 RPL7P46-201ENST00000425129 740 ntBASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 OR5AL2P-201ENST00000532185 920 ntBASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 MIR7153-201ENST00000637758 57 ntBASIC4.85□□□□□ -1.63
CDK11AQ9UQ88 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 Y_RNA.255-201ENST00000364581 97 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 RNU6-1027P-201ENST00000383998 107 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 RNU6-908P-201ENST00000410160 94 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 RPS15AP6-201ENST00000420703 385 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 AL139132.1-201ENST00000431587 344 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 AC020550.1-201ENST00000447385 163 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 GMFBP1-201ENST00000467831 427 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 AL163973.1-201ENST00000484753 577 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 RNA5SP503-201ENST00000517047 117 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 RN7SKP258-201ENST00000517151 304 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 AC118273.2-201ENST00000532092 465 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 TGIF1P1-201ENST00000558095 802 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 MIR4775-201ENST00000581168 75 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 AC025034.2-201ENST00000623264 286 ntBASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDK11AQ9UQ88 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
CDK11AQ9UQ88 AC006020.1-201ENST00000420179 1854 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 SMIM11P1-201ENST00000369586 178 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 RNU6-946P-201ENST00000383878 107 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 RNU6-741P-201ENST00000383889 107 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 EEF1A1P41-201ENST00000414667 207 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 GTF2IP20-201ENST00000431663 360 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 AL512844.2-201ENST00000433990 593 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 MTATP6P23-201ENST00000440153 476 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 NEFMP1-201ENST00000443423 1006 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 MTND1P18-201ENST00000448191 573 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 AC010099.1-201ENST00000455434 375 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 TTC39CP1-201ENST00000512513 755 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 RNU6-835P-201ENST00000516974 104 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 AC093331.1-201ENST00000521474 169 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 AMZ2P1-203ENST00000565833 850 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 DISC2.1-201ENST00000612827 205 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 GABRG2-229ENST00000641017 3628 ntBASIC4.83□□□□□ -1.64
CDK11AQ9UQ88 AC091564.4-201ENST00000533934 2194 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 MIR22-201ENST00000362190 85 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 Y_RNA.38-201ENST00000362617 102 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 RNY3P3-201ENST00000363816 102 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms