Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNU5F-8P-201ENST00000515941 111 ntBASIC0.78□□□□□ -2.28
SCN11AQ9UI33 SCARNA11.3-201ENST00000517276 130 ntBASIC0.78□□□□□ -2.28
SCN11AQ9UI33 AC243829.6-201ENST00000612652 106 ntBASIC0.78□□□□□ -2.28
SCN11AQ9UI33 AC091925.2-201ENST00000625059 256 ntBASIC0.78□□□□□ -2.28
SCN11AQ9UI33 AP000776.1-201ENST00000530032 1663 ntBASIC0.78□□□□□ -2.28
SCN11AQ9UI33 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.78□□□□□ -2.28
SCN11AQ9UI33 RNU6-35P-201ENST00000384530 107 ntBASIC0.78□□□□□ -2.29
SCN11AQ9UI33 RNU4-78P-201ENST00000410940 126 ntBASIC0.78□□□□□ -2.29
SCN11AQ9UI33 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.78□□□□□ -2.29
SCN11AQ9UI33 SNORA8-201ENST00000384574 139 ntBASIC0.77□□□□□ -2.29
SCN11AQ9UI33 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.77□□□□□ -2.29
SCN11AQ9UI33 MTCO3P4-201ENST00000419236 787 ntBASIC0.77□□□□□ -2.29
SCN11AQ9UI33 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN11AQ9UI33 AC093106.2-201ENST00000428212 385 ntBASIC0.77□□□□□ -2.29
SCN11AQ9UI33 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.77□□□□□ -2.29
SCN11AQ9UI33 AC098591.2-201ENST00000510152 315 ntBASIC0.77□□□□□ -2.29
SCN11AQ9UI33 AP003400.5-201ENST00000624827 617 ntBASIC0.77□□□□□ -2.29
SCN11AQ9UI33 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN11AQ9UI33 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.77□□□□□ -2.29
SCN11AQ9UI33 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
SCN11AQ9UI33 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SCN11AQ9UI33 HMGN2P39-201ENST00000398005 273 ntBASIC0.76□□□□□ -2.29
SCN11AQ9UI33 AC000111.3-201ENST00000433478 193 ntBASIC0.76□□□□□ -2.29
SCN11AQ9UI33 AL714022.1-201ENST00000439897 151 ntBASIC0.76□□□□□ -2.29
SCN11AQ9UI33 RNU6-420P-201ENST00000458780 107 ntBASIC0.76□□□□□ -2.29
SCN11AQ9UI33 AC116337.2-201ENST00000477662 156 ntBASIC0.76□□□□□ -2.29
SCN11AQ9UI33 AP003355.1-201ENST00000518956 587 ntBASIC0.76□□□□□ -2.29
SCN11AQ9UI33 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.76□□□□□ -2.29
SCN11AQ9UI33 OR6C7P-201ENST00000547875 934 ntBASIC0.76□□□□□ -2.29
SCN11AQ9UI33 AL078605.1-201ENST00000603529 500 ntBASIC0.76□□□□□ -2.29
SCN11AQ9UI33 AC068276.1-201ENST00000605793 379 ntBASIC0.76□□□□□ -2.29
SCN11AQ9UI33 AL355802.3-201ENST00000607571 545 ntBASIC0.76□□□□□ -2.29
SCN11AQ9UI33 ELL2P3-201ENST00000457883 1602 ntBASIC0.76□□□□□ -2.29
SCN11AQ9UI33 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 SNORA40.19-201ENST00000390846 128 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 AL034418.1-201ENST00000448675 860 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 PNPLA4P1-201ENST00000458328 305 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 AC022447.1-201ENST00000515358 464 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.75□□□□□ -2.29
SCN11AQ9UI33 MED28P6-201ENST00000558776 231 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 AC018638.7-201ENST00000605836 1114 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 AP006248.3-201ENST00000623580 594 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 RNU6-338P-201ENST00000383888 105 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.75□□□□□ -2.29
SCN11AQ9UI33 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 AL133241.1-201ENST00000556832 487 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 AC008945.2-201ENST00000606056 604 ntBASIC0.75□□□□□ -2.29
SCN11AQ9UI33 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.75□□□□□ -2.29
SCN11AQ9UI33 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.74□□□□□ -2.29
SCN11AQ9UI33 Y_RNA.412-201ENST00000384001 104 ntBASIC0.74□□□□□ -2.29
SCN11AQ9UI33 RNU6-1293P-201ENST00000384077 107 ntBASIC0.74□□□□□ -2.29
SCN11AQ9UI33 SSXP10-201ENST00000402595 565 ntBASIC0.74□□□□□ -2.29
SCN11AQ9UI33 AL136372.1-201ENST00000403060 228 ntBASIC0.74□□□□□ -2.29
SCN11AQ9UI33 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.74□□□□□ -2.29
SCN11AQ9UI33 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.74□□□□□ -2.29
SCN11AQ9UI33 AC109927.2-201ENST00000506416 303 ntBASIC0.74□□□□□ -2.29
SCN11AQ9UI33 CBX3P3-201ENST00000508108 532 ntBASIC0.74□□□□□ -2.29
SCN11AQ9UI33 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.74□□□□□ -2.29
SCN11AQ9UI33 NIFKP6-201ENST00000598115 845 ntBASIC0.74□□□□□ -2.29
SCN11AQ9UI33 FRG1HP-204ENST00000617940 757 ntBASIC0.74□□□□□ -2.29
SCN11AQ9UI33 RNU6-156P-201ENST00000621869 107 ntBASIC0.74□□□□□ -2.29
SCN11AQ9UI33 AL049737.1-201ENST00000413920 1403 ntBASIC0.74□□□□□ -2.29
SCN11AQ9UI33 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
SCN11AQ9UI33 AC099677.1-201ENST00000420575 175 ntBASIC0.73□□□□□ -2.29
SCN11AQ9UI33 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.73□□□□□ -2.29
SCN11AQ9UI33 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.73□□□□□ -2.29
SCN11AQ9UI33 MTND6P13-201ENST00000443510 523 ntBASIC0.73□□□□□ -2.29
SCN11AQ9UI33 AL096803.2-201ENST00000450032 677 ntBASIC0.73□□□□□ -2.29
SCN11AQ9UI33 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 RNU6-775P-201ENST00000459318 96 ntBASIC0.73□□□□□ -2.29
SCN11AQ9UI33 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 TPTE2P4-201ENST00000258589 1605 ntBASIC0.73□□□□□ -2.29
SCN11AQ9UI33 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 DYNLT3P2-201ENST00000442517 295 ntBASIC0.73□□□□□ -2.29
SCN11AQ9UI33 AC018437.1-201ENST00000492214 406 ntBASIC0.73□□□□□ -2.29
SCN11AQ9UI33 UBL5P1-201ENST00000507979 193 ntBASIC0.73□□□□□ -2.29
SCN11AQ9UI33 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN11AQ9UI33 RNU6-1187P-201ENST00000364771 110 ntBASIC0.72□□□□□ -2.29
SCN11AQ9UI33 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SCN11AQ9UI33 SNORA81-201ENST00000408493 178 ntBASIC0.72□□□□□ -2.29
SCN11AQ9UI33 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
SCN11AQ9UI33 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN11AQ9UI33 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN11AQ9UI33 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.72□□□□□ -2.29
SCN11AQ9UI33 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN11AQ9UI33 AC015849.6-201ENST00000605454 474 ntBASIC0.72□□□□□ -2.29
SCN11AQ9UI33 AC099842.1-201ENST00000619919 596 ntBASIC0.72□□□□□ -2.29
SCN11AQ9UI33 AP003399.1-201ENST00000637534 361 ntBASIC0.72□□□□□ -2.29
SCN11AQ9UI33 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.71□□□□□ -2.3
SCN11AQ9UI33 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms