Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AL078601.1-201ENST00000444542 271 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC092798.1-201ENST00000458542 409 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 RNU7-187P-201ENST00000458985 68 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC116337.1-201ENST00000509680 687 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 RNA5SP208-201ENST00000516156 78 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 RN7SKP83-201ENST00000516512 178 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC120057.2-201ENST00000571520 271 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 MIR5690-201ENST00000583739 73 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC007938.3-201ENST00000604965 623 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC064836.2-201ENST00000609491 462 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AC083809.1-201ENST00000615051 472 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 uc_338.32-201ENST00000615087 172 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 PISRT1.1-201ENST00000616930 107 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 MIR6500-201ENST00000622700 86 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.54□□□□□ -1.84
RLIMQ9NVW2 AL133412.1-201ENST00000380194 2992 ntBASIC3.54□□□□□ -1.84
RLIMQ9NVW2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AC073073.2-201ENST00000609827 2578 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 MIR372-201ENST00000362225 67 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 RNU6-1188P-201ENST00000363795 107 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 RNU6-1329P-201ENST00000365664 107 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 RNU6-1227P-201ENST00000383981 107 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 RNU6-166P-201ENST00000384371 107 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 MIR199A2-201ENST00000385289 110 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 SNORA40C-201ENST00000391285 128 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 UBE2V1P4-201ENST00000425374 344 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AC098614.2-201ENST00000426040 255 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 C4BPAP2-201ENST00000428434 478 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AL158071.1-201ENST00000430315 461 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AL627311.1-201ENST00000431514 115 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AL162151.2-201ENST00000448875 158 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 snoU109.2-201ENST00000459316 135 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 RPL21P13-201ENST00000488305 481 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AC020593.1-201ENST00000507399 299 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 RNU1-61P-201ENST00000516107 151 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 RNU6-1282P-201ENST00000516735 96 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 RNU6-928P-201ENST00000516876 104 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 H3F3AP1-201ENST00000559984 334 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AL121917.1-203ENST00000605534 577 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 AC124303.1-201ENST00000605703 360 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.53□□□□□ -1.84
RLIMQ9NVW2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RLIMQ9NVW2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.52□□□□□ -1.85
RLIMQ9NVW2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.52□□□□□ -1.85
RLIMQ9NVW2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.52□□□□□ -1.85
RLIMQ9NVW2 KPNA2P1-201ENST00000458289 1591 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.52□□□□□ -1.85
RLIMQ9NVW2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RLIMQ9NVW2 SPRR2C-201ENST00000290702 219 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 SNORD62.1-201ENST00000362541 86 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 Y_RNA.151-201ENST00000363566 112 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 SNORA62-201ENST00000365493 153 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 AC068538.1-201ENST00000376856 336 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 RNU1-13P-201ENST00000384499 162 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 MIR34A-201ENST00000385130 110 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 AL591034.1-201ENST00000407447 340 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 Z98941.1-201ENST00000407764 100 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 RNU6-293P-201ENST00000411259 106 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 RNU6-954P-201ENST00000411355 107 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 RHEBP3-201ENST00000411920 351 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.52□□□□□ -1.85
RLIMQ9NVW2 RPL17P36-201ENST00000420302 549 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 AL353729.1-201ENST00000425044 720 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 OR4C10P-201ENST00000434991 931 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 SNORA71B-202ENST00000439232 272 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 AC005741.1-201ENST00000511094 432 ntBASIC3.52□□□□□ -1.85
RLIMQ9NVW2 RAC1P2-201ENST00000511164 579 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms