Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 SNORA48.9-201ENST00000516419 162 ntBASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 AC090115.3-201ENST00000553218 849 ntBASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 AL359314.1-201ENST00000616913 261 ntBASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 MIR378A-201ENST00000362177 66 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 RNU5E-1-201ENST00000362477 120 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 RNU6-543P-201ENST00000362576 108 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 RNU6-271P-201ENST00000363858 105 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 RNU6-152P-201ENST00000384037 107 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 RNU11-3P-201ENST00000391111 133 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 RNA5SP501-201ENST00000410990 112 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 CST2P1-201ENST00000425770 87 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AC007919.1-201ENST00000429380 217 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 KATNBL1P6-201ENST00000453433 915 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AC006512.1-201ENST00000468816 291 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AL133373.1-201ENST00000497098 94 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 UBL5P1-201ENST00000507979 193 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AC006199.1-201ENST00000548728 219 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 NACAP3-201ENST00000552100 481 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 VN1R80P-201ENST00000597126 338 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AC123912.5-201ENST00000605470 343 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AP005229.2-201ENST00000609980 697 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AC012676.2-201ENST00000619258 186 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AP003485.1-201ENST00000625093 753 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AC090517.3-201ENST00000625170 141 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 AC099063.3-201ENST00000642066 185 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 GDI2P1-201ENST00000429312 1336 ntBASIC0.6□□□□□ -2.31
CDC42SE2Q9NRR3 SNORD114-2-201ENST00000363953 78 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 MIR532-201ENST00000385025 91 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 NDUFS5P4-201ENST00000412983 318 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 PRPS1P1-201ENST00000445305 876 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 RPS27AP10-201ENST00000496103 208 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC025465.3-201ENST00000510570 311 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 RNU6-351P-201ENST00000516097 100 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 RN7SKP219-201ENST00000516825 296 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC125611.1-201ENST00000549563 229 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC002400.1-201ENST00000569310 726 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC136932.1-201ENST00000574771 208 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC005261.5-201ENST00000596280 355 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC025754.2-201ENST00000606491 432 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC004492.1-201ENST00000607036 742 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 AC092953.2-201ENST00000608000 699 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 DUSP12P1-201ENST00000612874 516 ntBASIC0.59□□□□□ -2.31
CDC42SE2Q9NRR3 Z75746.1-201ENST00000440243 2080 ntBASIC0.59□□□□□ -2.32
CDC42SE2Q9NRR3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 ICE2P2-201ENST00000483823 2787 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 RNU6-439P-201ENST00000384188 106 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 RNU1-57P-201ENST00000384491 166 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 MIR23A-201ENST00000385245 73 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AL109755.1-201ENST00000401791 649 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 RN7SKP61-201ENST00000410642 295 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AC078974.1-201ENST00000411597 223 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AL365400.1-201ENST00000431854 640 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 FDX1P2-201ENST00000450769 375 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AP001324.2-201ENST00000461163 319 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 RPS26P55-201ENST00000471178 356 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AC021382.1-201ENST00000483523 359 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 BOLA3P3-201ENST00000505182 232 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 SNORA31.22-201ENST00000517204 135 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AP003066.2-201ENST00000529375 555 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms