Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNA5SP290-201ENST00000517133 127 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AC006199.1-201ENST00000548728 219 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 MIR4713-201ENST00000582691 75 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 MIR4452-201ENST00000583004 71 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 OR4H6P-202ENST00000603819 340 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 MTND5P35-201ENST00000557537 1720 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 MIR16-2-201ENST00000362117 81 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 MIR1302-8-201ENST00000408342 128 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 RNU2-63P-201ENST00000410792 194 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AC007919.1-201ENST00000429380 217 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 RPL7P55-201ENST00000450522 746 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 SNRPGP9-201ENST00000456025 225 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AC019176.1-201ENST00000518519 225 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AC084364.2-201ENST00000546924 395 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AC138915.2-201ENST00000569776 97 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 BBIP1P1-201ENST00000602999 279 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AC004853.1-201ENST00000604902 698 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AC100814.1-201ENST00000606963 623 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AC024257.5-201ENST00000612739 531 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AC109809.1-201ENST00000619665 545 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 AL356473.1-201ENST00000406203 1408 ntBASIC1.13□□□□□ -2.23
KIAA1549Q9HCM3 Y_RNA.25-201ENST00000362528 102 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 RNU6-878P-201ENST00000384578 110 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AL356421.1-201ENST00000403255 413 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AL158823.1-201ENST00000418441 478 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 RNU6-775P-201ENST00000459318 96 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AC087884.1-201ENST00000469738 328 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AC026271.5-201ENST00000577873 130 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 MIR4637-201ENST00000582405 84 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AC084824.4-201ENST00000620106 731 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 RNU6-884P-201ENST00000363889 107 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AL451054.2-201ENST00000420896 202 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 SNORA48.9-201ENST00000516419 162 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AC002545.1-201ENST00000592511 181 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 uc_338.12-201ENST00000616344 181 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 MIR5739-201ENST00000619803 80 ntBASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.12□□□□□ -2.23
KIAA1549Q9HCM3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 RNU6-839P-201ENST00000363347 108 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 PTGES3P2-201ENST00000407942 482 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 RNU2-49P-201ENST00000410666 184 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 MTATP6P27-201ENST00000416987 621 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 AC092634.6-201ENST00000418558 192 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 MTCYBP15-201ENST00000433123 1127 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 DNAJC19P4-201ENST00000440115 345 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 SNORA31.6-201ENST00000516241 130 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 RNU7-193P-201ENST00000516723 65 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 AC008015.1-201ENST00000555505 465 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 AC011451.2-201ENST00000604303 598 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 AC243773.3-201ENST00000613270 256 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 AC002550.2-201ENST00000621246 394 ntBASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.11□□□□□ -2.23
KIAA1549Q9HCM3 RNU6-748P-201ENST00000384648 107 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 SNORA40.6-201ENST00000391153 128 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 RNU2-33P-201ENST00000410344 192 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AC092427.1-201ENST00000439177 601 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AC005297.2-201ENST00000450430 606 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AC006512.1-201ENST00000468816 291 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 RNU6-840P-201ENST00000517275 65 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 ADAM3B-201ENST00000569937 840 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 MIR4666A-201ENST00000580160 79 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms