Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AC073063.1-201ENST00000434352 607 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 RPL21P41-201ENST00000459863 264 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 RPS23P3-201ENST00000470993 430 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AC009901.1-201ENST00000506703 541 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AC025423.5-201ENST00000550230 219 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 OR4H12P-201ENST00000556269 907 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AC090877.1-201ENST00000561418 344 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 MIR5187-201ENST00000583479 76 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AC012669.1-201ENST00000603209 283 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 IGHV3-29-201ENST00000604817 344 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AL138825.1-201ENST00000618587 192 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AC091812.1-201ENST00000432235 1948 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 AC093535.2-201ENST00000624769 2326 ntBASIC4.26□□□□□ -1.73
BCAS3Q9H6U6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 UBE3AP2-201ENST00000429033 2259 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 AC018529.3-201ENST00000624212 2254 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 RNU6-874P-201ENST00000362390 105 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 Y_RNA.106-201ENST00000363189 100 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 Y_RNA.307-201ENST00000365022 117 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 RNU6-26P-201ENST00000383985 107 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 Y_RNA.489-201ENST00000384410 101 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 SNORA70E-201ENST00000384492 135 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 RPS4XP7-201ENST00000406274 780 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 MIR1252-201ENST00000408861 65 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 RNU2-43P-201ENST00000410306 190 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 AC097713.2-201ENST00000430199 356 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 AC073910.1-201ENST00000445047 438 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 AC068781.1-201ENST00000488231 618 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 AC104564.1-201ENST00000493028 407 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 AC093852.1-201ENST00000503587 266 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 RNY3P15-201ENST00000516297 97 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 AC012468.1-201ENST00000604888 430 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 AC019176.2-201ENST00000611579 315 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 SDR42E1P2-201ENST00000614861 481 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 MIR8062-201ENST00000621515 85 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 CDC27P3-201ENST00000635418 1910 ntBASIC4.25□□□□□ -1.73
BCAS3Q9H6U6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 Y_RNA.2-201ENST00000362330 96 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 RNU4-70P-201ENST00000384579 139 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 RNU6-306P-201ENST00000384617 107 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 AL139039.1-201ENST00000401900 692 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 RNU6-174P-201ENST00000410406 106 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 HMGN2P31-201ENST00000432430 273 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 AC010469.1-201ENST00000463864 576 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 RNU6-120P-201ENST00000516077 103 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 SNORA40.14-201ENST00000516543 86 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 AC069113.1-201ENST00000517763 267 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 LRRC37A5P-203ENST00000580181 585 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 AC005357.1-201ENST00000588399 301 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 AC002044.1-201ENST00000606707 158 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 U2.1-201ENST00000618978 145 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 MTND5P7-201ENST00000413558 1798 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.24□□□□□ -1.73
BCAS3Q9H6U6 AC005183.1-201ENST00000603687 1979 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 197.8 ms