Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MIR4715-201ENST00000584117 79 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 MIR4293-201ENST00000584305 78 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 PISRT1.1-201ENST00000616930 107 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 SNHG22-203ENST00000617833 660 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 AL357559.1-201ENST00000622228 274 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 AL136313.1-201ENST00000624804 202 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 AC244205.2-202ENST00000635781 342 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS11Q9H270 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS11Q9H270 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
VPS11Q9H270 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS11Q9H270 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS11Q9H270 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
VPS11Q9H270 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VPS11Q9H270 RNU6-562P-201ENST00000362731 107 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 RNU6-1284P-201ENST00000363701 100 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 RNA5SP447-201ENST00000363749 119 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 MIR450B-201ENST00000401182 78 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 MIR548I2-201ENST00000408348 149 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS11Q9H270 AC011933.1-201ENST00000413334 321 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 AL590139.1-201ENST00000416267 400 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS11Q9H270 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS11Q9H270 AC139712.2-201ENST00000424302 339 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS11Q9H270 HIGD1AP11-201ENST00000438361 280 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 RPS29P22-201ENST00000472363 168 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS11Q9H270 CEACAMP10-202ENST00000495431 496 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 AC026726.1-201ENST00000512859 601 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 RNU6-189P-201ENST00000516120 101 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 SNORA70.16-201ENST00000516390 95 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 SCARNA16.2-201ENST00000516520 172 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 AC011979.2-201ENST00000527568 352 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
VPS11Q9H270 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
VPS11Q9H270 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS11Q9H270 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS11Q9H270 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS11Q9H270 MIR6748-201ENST00000610433 71 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS11Q9H270 AL591424.2-201ENST00000617023 128 ntBASIC4.05□□□□□ -1.76
VPS11Q9H270 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS11Q9H270 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS11Q9H270 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS11Q9H270 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS11Q9H270 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS11Q9H270 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 RNU1-18P-201ENST00000363062 164 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 Y_RNA.126-201ENST00000363382 111 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 RNU1-132P-201ENST00000364300 164 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 RNU6-200P-201ENST00000364743 107 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 RNU6-61P-201ENST00000365528 109 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 Y_RNA.380-201ENST00000365663 111 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 RNU6-398P-201ENST00000384143 109 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 Y_RNA.576-201ENST00000384781 102 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 RNA5SP219-201ENST00000390940 113 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 RNU2-23P-201ENST00000410545 195 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 AC114491.1-201ENST00000416095 246 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS11Q9H270 AL590135.1-201ENST00000422215 156 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 RPL7P46-201ENST00000425129 740 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 PIGPP3-201ENST00000425307 415 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 COX6B1P7-201ENST00000430845 235 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 AL358472.1-201ENST00000431295 329 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 SNAP23P1-201ENST00000433229 246 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 AL162151.2-201ENST00000448875 158 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.04□□□□□ -1.76
VPS11Q9H270 AC104472.2-201ENST00000469035 601 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 RPS27AP1-201ENST00000475545 471 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS11Q9H270 AC022447.4-201ENST00000504053 364 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS11Q9H270 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.04□□□□□ -1.76
VPS11Q9H270 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS11Q9H270 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS11Q9H270 AC025034.2-201ENST00000623264 286 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 AC091903.1-201ENST00000624322 454 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 AL606534.2-204ENST00000635008 178 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 AL512643.1-201ENST00000635735 524 ntBASIC4.04□□□□□ -1.76
VPS11Q9H270 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS11Q9H270 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS11Q9H270 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS11Q9H270 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS11Q9H270 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VPS11Q9H270 RNU6-179P-201ENST00000363350 107 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 Y_RNA.180-201ENST00000363867 113 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 Y_RNA.376-201ENST00000365638 108 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 SNORA24.1-201ENST00000384401 135 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms