Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 AL133243.3-201ENST00000617415 3004 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 FAM91A3P-201ENST00000456826 2544 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 ASNSP1-201ENST00000518311 1939 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 UBE2L2-201ENST00000254302 429 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC126755.2-208ENST00000327792 462 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC007685.1-201ENST00000329806 452 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC138969.1-213ENST00000331436 462 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RNU6-1249P-201ENST00000363237 111 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RNA5SP28-201ENST00000363841 119 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 Y_RNA.358-201ENST00000365491 99 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RNU6-76P-201ENST00000384060 104 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RNU6-1081P-201ENST00000384537 107 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 Y_RNA.581-201ENST00000391017 97 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 MIR190B-201ENST00000401119 79 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RNU6-712P-201ENST00000410558 100 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RNA5SP146-201ENST00000410743 123 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 TMEM167AP1-201ENST00000423409 219 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RPS29P17-201ENST00000430795 166 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC087650.1-201ENST00000431445 468 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RNU7-87P-201ENST00000459343 62 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RN7SL98P-201ENST00000462271 300 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RN7SL303P-201ENST00000469773 251 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC109327.1-201ENST00000471666 403 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RN7SL812P-201ENST00000493791 279 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 APOOP4-201ENST00000513530 597 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RNU1-86P-201ENST00000516108 154 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RNU6-1278P-201ENST00000516130 107 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RNU1-107P-201ENST00000516617 154 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RNU6-1315P-201ENST00000517187 99 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC008489.1-201ENST00000524271 483 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC004024.1-201ENST00000549244 247 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 ATP5J2P6-201ENST00000565203 266 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 Z83818.1-201ENST00000603584 150 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 MZT1P2-201ENST00000604387 248 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC009318.2-201ENST00000610917 651 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC091905.2-201ENST00000623143 306 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 U6.92-201ENST00000636464 89 ntBASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.69□□□□□ -1.82
SSBP3Q9BWW4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-37P-201ENST00000362692 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU1-20P-201ENST00000363314 162 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-11P-201ENST00000364234 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-7-201ENST00000364784 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-8-201ENST00000365467 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-395P-201ENST00000365662 106 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-25P-201ENST00000383873 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-1-201ENST00000383898 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU1-63P-201ENST00000383902 164 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-36P-201ENST00000384172 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-4P-201ENST00000384205 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-5P-201ENST00000384238 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-3P-201ENST00000384314 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-16P-201ENST00000384385 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-15P-201ENST00000384534 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-2-201ENST00000384627 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-29P-201ENST00000384637 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 Y_RNA.541-201ENST00000384640 113 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 RNU6-9-201ENST00000384776 107 ntBASIC3.68□□□□□ -1.82
SSBP3Q9BWW4 MIR708-201ENST00000390708 88 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms