Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 SNORD56.1-201ENST00000362913 68 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 RNU1-20P-201ENST00000363314 162 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 RNA5SP366-201ENST00000365454 123 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 MIR3065-201ENST00000390137 79 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 RNA5SP372-201ENST00000390836 115 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 RPL21P23-201ENST00000446654 460 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 MED28P2-201ENST00000475771 317 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 SNRPGP18-201ENST00000553000 214 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 AC025281.1-201ENST00000567026 265 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 MTCO3P13-201ENST00000577757 781 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 AC079587.1-201ENST00000603846 277 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 AC019159.1-201ENST00000605094 187 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 AC090617.7-201ENST00000623952 126 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 UBE3AP2-201ENST00000429033 2259 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 RNU6-842P-201ENST00000384269 107 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 MIR767-201ENST00000390228 109 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 RNA5SP354-201ENST00000391247 136 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 AL591034.2-201ENST00000402839 359 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 SNORA11F-201ENST00000408237 128 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 AC011933.1-201ENST00000413334 321 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 PTGES3P4-201ENST00000426243 356 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 AC090096.1-201ENST00000489168 390 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 AC010265.1-201ENST00000513509 211 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 ACA59.2-201ENST00000517061 156 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 IGLVIV-65-201ENST00000517313 360 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 AP003072.1-201ENST00000531740 145 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 uc_338.13-201ENST00000618243 179 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 AC097372.5-201ENST00000623665 376 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 AC010680.1-201ENST00000590024 3590 ntBASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.87□□□□□ -1.63
TRAIPQ9BWF2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 RNU6-490P-201ENST00000362985 107 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 Y_RNA.202-201ENST00000364083 110 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 SNORA41-201ENST00000384675 132 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 RNU6-174P-201ENST00000410406 106 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 RNU2-49P-201ENST00000410666 184 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AC096649.2-201ENST00000416186 393 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AC074117.2-201ENST00000417130 397 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 PHBP16-201ENST00000446318 950 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AC012671.1-201ENST00000451912 203 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AC068781.1-201ENST00000488231 618 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 RNU6-470P-201ENST00000515954 104 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 SNORD59.2-201ENST00000516873 68 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 MIR3160-1-201ENST00000577972 85 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AC078795.3-201ENST00000602913 472 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 7SK.7-201ENST00000603504 247 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AC113403.1-201ENST00000604910 193 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AL591034.3-201ENST00000605511 685 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 SNX18P1Y-201ENST00000616231 511 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 MIR3653-201ENST00000625572 110 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 AC032011.1-201ENST00000611703 1549 ntBASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.86□□□□□ -1.63
TRAIPQ9BWF2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AC006971.1-201ENST00000407916 4486 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms