Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 NDUFB1P1-201ENST00000435191 180 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 BRK1P2-201ENST00000442875 223 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 NEFMP1-201ENST00000443423 1006 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 PRDX3P3-201ENST00000447765 522 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.8□□□□□ -1.96
DUX3Q96PT4 DYNLL1P5-201ENST00000467158 270 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 AC117503.1-201ENST00000472241 394 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 AC025518.1-201ENST00000479856 347 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 AC096576.1-201ENST00000489014 359 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.8□□□□□ -1.96
DUX3Q96PT4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.8□□□□□ -1.96
DUX3Q96PT4 SNORA19.2-201ENST00000516013 114 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 RNU6-566P-201ENST00000516790 107 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 Y_RNA.718-201ENST00000517110 102 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.8□□□□□ -1.96
DUX3Q96PT4 AC100870.1-201ENST00000522035 505 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.8□□□□□ -1.96
DUX3Q96PT4 AL121603.1-201ENST00000553815 142 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 AC012182.1-201ENST00000570133 895 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 AC067852.3-201ENST00000589177 561 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 AL133393.1-201ENST00000603277 287 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 AP001486.3-201ENST00000615334 372 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 AC015967.1-201ENST00000619893 476 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 U6.105-201ENST00000637379 88 ntBASIC2.8□□□□□ -1.96
DUX3Q96PT4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.8□□□□□ -1.96
DUX3Q96PT4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.8□□□□□ -1.96
DUX3Q96PT4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
DUX3Q96PT4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
DUX3Q96PT4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
DUX3Q96PT4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
DUX3Q96PT4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
DUX3Q96PT4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
DUX3Q96PT4 Y_RNA.31-201ENST00000362574 102 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 RNU6-715P-201ENST00000365204 103 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 RNA5SP235-201ENST00000365411 114 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 Y_RNA.384-201ENST00000383909 102 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 MIR183-201ENST00000384958 110 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 MIR23A-201ENST00000385245 73 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 SAR1AP2-201ENST00000392696 594 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 AL590632.1-201ENST00000424289 371 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 AL669831.1-202ENST00000428504 417 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 GTF2IP13-201ENST00000438487 386 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 RN7SL93P-201ENST00000463035 293 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 RPL7P5-201ENST00000471472 736 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 Y_RNA.654-201ENST00000497848 106 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 AC091885.1-201ENST00000506658 268 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 RN7SKP60-201ENST00000516985 239 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 RNU6-685P-201ENST00000517088 95 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 HMGN1P28-201ENST00000521340 364 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 COPS8P3-201ENST00000526024 482 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 APOOP3-201ENST00000536787 586 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 AC007458.1-201ENST00000542812 373 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 AL360085.1-201ENST00000604713 532 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 AC022893.3-201ENST00000607665 437 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.79□□□□□ -1.96
DUX3Q96PT4 MIR7153-201ENST00000637758 57 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 CEP170P1-201ENST00000502249 4587 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
DUX3Q96PT4 AF117829.1-206ENST00000621883 3802 ntBASIC2.79□□□□□ -1.96
DUX3Q96PT4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DUX3Q96PT4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DUX3Q96PT4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DUX3Q96PT4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
DUX3Q96PT4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
DUX3Q96PT4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
DUX3Q96PT4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DUX3Q96PT4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
DUX3Q96PT4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DUX3Q96PT4 SNORA63-201ENST00000363450 132 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 RNU6-76P-201ENST00000384060 104 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 RNU6-1181P-201ENST00000384191 106 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 Y_RNA.530-201ENST00000384587 101 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 RNVU1-14-201ENST00000384770 164 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 MIR1302-11-201ENST00000408051 138 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 MIR1302-9-201ENST00000408365 138 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 MIR548K-201ENST00000408406 116 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 MIR1302-10-201ENST00000408734 138 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 RNA5SP129-201ENST00000410276 118 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC017079.2-201ENST00000416102 485 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 USP9YP20-201ENST00000419224 558 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 MTND2P23-201ENST00000422990 651 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms